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Domain assignment for XP_004008896.1.66739 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004008896.1.66739
Domain Number 1 Region: 482-572
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.58e-19
Family Canonical RBD 0.00000482
Further Details:      
 
Domain Number 2 Region: 391-475
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.44e-16
Family Canonical RBD 0.00000943
Further Details:      
 
Weak hits

Sequence:  XP_004008896.1.66739
Domain Number - Region: 290-322
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000555
Family Classic zinc finger, C2H2 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004008896.1.66739
Sequence length 844
Comment PREDICTED: matrin-3 isoform X3 [Ovis aries]; AA=GCF_000298735.2; RF=representative genome; TAX=9940; STAX=9940; NAME=Ovis aries; breed=Texel; AL=Chromosome; RT=Major
Sequence
MSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLASLMNLGM
SSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDADQASNILASFGLSAR
DLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVPRDDWEE
KRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDSFFGETS
HNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCSICDLPV
HSNKEWSQHINGASHSRRCQLLLEIYPEWNPDTDTGHTMGDPFMLQQSTNPAPGILGPPP
PSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVE
PFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKYKRIKKP
EGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEME
TREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPD
GKESPSDKKSKTDGSQKTESTAEGKEQEEKSGEDGEKDTKDDQAEQEPNMLLESEDELLV
DEEEAAALLESGSSVGDETDLANLGDVASDGKKEPSDKAVKKDANASASGAAKKKLKKRR
FPGNMEGFVTLDEVGDEEDSELQKLRKSGMAFKSGDKNDDGLVEIKVDKIEELDQENEAA
LENGIKNEENTEPGAESAENADDPNKDTSENADGQSDENKEDYTIPDEYRIGPYQPNVPV
EISE
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Identical sequences F1MXI4
ENSBTAP00000051115 XP_004008896.1.66739 XP_005683065.1.57651 XP_005971897.1.78601 XP_012006086.1.54773 XP_017905806.1.57651 XP_019820570.1.53367 XP_019820571.1.53367 ENSBTAP00000051115

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