SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_004057945.1.27298 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_004057945.1.27298
Domain Number 1 Region: 14-201
Classification Level Classification E-value
Superfamily PR-1-like 6.02e-40
Family PR-1-like 0.00026
Further Details:      
 
Domain Number 2 Region: 303-436
Classification Level Classification E-value
Superfamily C-type lectin-like 5.77e-27
Family C-type lectin domain 0.00093
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004057945.1.27298
Sequence length 446
Comment PREDICTED: C-type lectin domain family 18 member A isoform X6 [Gorilla gorilla gorilla]; AA=GCF_000151905.2; RF=representative genome; TAX=9595; STAX=9593; NAME=Gorilla gorilla gorilla; AL=Chromosome; RT=Major
Sequence
MLHPETSPGWGHLLAVLLALLGTTWAEVWPPQLQEQAPMAGALNRKESFLLLSLHNRLRS
WVQPPAADMRRLDWSDSLAQLAQARAALCGTPTPSLASGPWRTLQVGWNMQLLPAGLVSF
VEVVSLWFAEGQRYSHAAGECAHNATCTHYTQLVWATSSQLGCGRHLCSAGQAAIEAFVC
AYSPGGNWEVNGKTIVPYKKGAWCSLCTASVSGCFKAWDHAGGLCEVPRNPCRMSCQNHG
RLNISTCHCHCPPGYTGRYCQVRCSLQCVHGRFREEECSCVCDIGYGGAQCATKVHFPFH
TCDLRIDGDCFMVSSEADTYYRARMKCQRKGGVLAQIKSQKVQDILAFYLGRLETTNEVI
DSDFETTNFWIGLTYKTAKDSFRWATGEHQAFTSFAFEQPDNHGFGNCMELQASAAFNWN
DQRCKTRNRYICQFAQEHISRWGPGS
Download sequence
Identical sequences XP_004057945.1.27298 XP_004057947.1.27298 ENSGGOP00000022403

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]