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Domain assignment for XP_004061662.1.27298 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004061662.1.27298
Domain Number 1 Region: 36-129
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.28e-35
Family SCAN domain 0.00000279
Further Details:      
 
Domain Number 2 Region: 634-690
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.38e-24
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 3 Region: 364-421
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.72e-23
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 4 Region: 522-578
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.81e-22
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 5 Region: 577-634
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.11e-22
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 6 Region: 406-458
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.88e-17
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 7 Region: 679-731
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.92e-17
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 8 Region: 484-535
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000118
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004061662.1.27298
Sequence length 734
Comment PREDICTED: myeloid zinc finger 1 isoform X2 [Gorilla gorilla gorilla]; AA=GCF_000151905.2; RF=representative genome; TAX=9595; STAX=9593; NAME=Gorilla gorilla gorilla; AL=Chromosome; RT=Major
Sequence
MRPAVLGSPDRAPPEDEGPVMVKLEDSEEEGEAALWDPGPEAARLRFRCFRYEEATGPQE
ALAQLRELCRQWLRPEVRSKEQMLELLVLEQFLGALPPEIQARVQGQRPGSPEEAAALVD
GLRREPGGPRRWVTVQVQGQEVLSEKMEPSSFQPLPETEPPTPEPGPKTPPRTMQESPLG
LQVKEEPEVTEDSDFLESGPLAATQESVPTLLPEEAQRCGTVLDQAFPHSKPGPEGPSWR
EHPRALWHEEAGGIFSPGFALQLDSISAGPGSVSPHLHVPWDLGMAGLSGQIQSPSREGG
FAHALLLPSDLRSEQDPTDEDPCRGVGPALVTTRWRSPRGRSRGRPSTGGGVVRGGRCDV
CGKVFSQRSNLLRHQKIHTGERPFVCSECGRSFSRSSHLLRHQLTHTEERPFVCGDCGQG
FVRSARLEEHRRVHTGEQPFRCAECGQSFRQRSNLLQHQRIHGDPPGPGATPPAPPGAPE
PPGPFPCSECRESFARRAVLLEHQAVHTGDKSFGCVECGERFGRRSVLLQHRRVHSGERP
FACAECGQSFRQRSNLTQHRRIHTGERPFACAECGKAFRQRPTLTQHLRVHTGEKPFACP
ECGQRFSQRLKLTRHQRTHTGEKPYHCGECGLGFTQVSRLTEHQRIHTGERPFACPECGQ
SFRQHANLTQHRRIHTGERPYACPECGKAFRQRPTLTQHLRTHRREKPFACQDCGRRFHQ
STKLIQHQRVHSAE
Download sequence
Identical sequences G3RAV7
ENSGGOP00000012589 ENSGGOP00000012589 XP_004061662.1.27298 XP_018870954.1.27298

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