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Domain assignment for XP_004244640.1.44838 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004244640.1.44838
Domain Number 1 Region: 912-998
Classification Level Classification E-value
Superfamily CAD & PB1 domains 3.27e-20
Family PB1 domain 0.006
Further Details:      
 
Weak hits

Sequence:  XP_004244640.1.44838
Domain Number - Region: 388-456
Classification Level Classification E-value
Superfamily GAF domain-like 0.00471
Family GAF domain 0.019
Further Details:      
 
Domain Number - Region: 206-272
Classification Level Classification E-value
Superfamily GAF domain-like 0.0051
Family GAF domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004244640.1.44838
Sequence length 1008
Comment PREDICTED: protein NLP6-like isoform X1 [Solanum lycopersicum]; AA=GCF_000188115.3; RF=representative genome; TAX=4081; STAX=4081; NAME=Solanum lycopersicum; cultivar=Heinz 1706; AL=Chromosome; RT=Major
Sequence
MSEPGGGMTQNHLPKSKELTPATVTERESMMMDLDFDIDASWSFDQIFAAAAAVSSNPAS
PFLPCSPLWAFPDDNDEKPAGNGLSGALRISGHPRFVAYTGDLEATTETISVNTDKGRLT
SPISGLLPGDNPEGSCIIKERMTQALRYLKETSGERVLAQVWAPVKEAGRSVLTTSGQPF
VLDPECNGLHQYRTVSLMYMFAADGETDGVLGLPGRVFRLKLPEWTPNVQYYSSKEFPRL
DHALNYNVRGTLALPVFEPSGRSCVGVLELIMTSQKINYAAEVDKVCKALEAVNLKSSDI
LDHPNTQVYVMGYMNQICNEGRQNALVDILEILTAVCETYKLPLAQTWVPCRHRSVLADG
GGLRKSCSSFDGSCMGQICMSTTDVAFYVVDAHMWGFRDACAEHHLQRGQGVAGRAYASR
KSCYCEDITQFCKTEYPLVHYARMFGLTSCFAICLRSSHTANDDYILEFFLPPNSGDYSD
QPALLNSLLLTMKQHFRSLSIASGEELEHDWGSVEIIQASMEEKIDAKPESVPTAKTSPQ
LTSLPNGWVHLDPVGEQQSAVGSNVSKGARSTSGTGEAPNNVSNSDNKTSGKKSERKRGK
AEKTISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLK
CVIESVQGAEGAFTLTSLAPNSLPAAVSSISWPAGANVSNLPSSPSSKPSVFPEEKNEFF
HHGTPESHIEAEPSNQMLGGRVARKEEFTPMQNGFLHAEGTHKSRTGSVSREESAGTPTS
HGSCQGSPCAGNGFSPQNELVNSPAHESCMKVGGSLEAARQTTAEINLSSAFLMPQPIIP
KHTQEPFGGMLVEDAGSSHDLRNLCSPRDALVDERVPDYNLTNPPFSDAIAKDPVYVPPD
TIQQYSAWPEVTSVTIKATYKEDIIRFRLCLSSGIVKLKEEVAKRLKLELGTFYIKYLDD
DLEFVPISCDADLQECVDISRSSGSSIVRLLIHDIMSNLGSSCESSGK
Download sequence
Identical sequences K4CIX5
Solyc08g008410.2.1 Solyc08g008410.2.1 XP_004244640.1.44838

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