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Domain assignment for XP_004249321.1.44838 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004249321.1.44838
Domain Number 1 Region: 131-220
Classification Level Classification E-value
Superfamily Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 5.23e-20
Family Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004249321.1.44838
Sequence length 455
Comment PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Solanum lycopersicum]; AA=GCF_000188115.3; RF=representative genome; TAX=4081; STAX=4081; NAME=Solanum lycopersicum; cultivar=Heinz 1706; AL=Chromosome; RT=Major
Sequence
MAKSSGTLDKWRDYFRTANSDIFDIIEYAVMVAAVDCPKEFKMRRDRIAEMLFTCKVTMC
FGCEKVDLAVPIAGNDDEGKIKSKDEFGGSKESKVNSRIDHHDVEMNVNQVSNYSYGEAE
ALTEEMEEETQTFGEVMRIKDVIDNNQAESAELFECLRRLQLMALSVETLKATEIGKSVN
SLRKHNSKDVRHLSRTLIEDWKVLVDEWVNATAAFAGNESTPESMKASVVDQDEEGLPSP
PLDDLAFFSAQTTSIELSQFFDGMDDDGNPRNSGGFNVNRGNGRKPSLGNQNIPLQKKQS
ADCFNASPKENKGEQQKKQEAVIKKQTTVAKPTKPSGGEFGPGRPTKPALEQKLKVNEMN
FQQKSDKGTIQKRPVASQQNKLRHSDEDAVQVKLEATKRKLQERYQEAEKAKRQRTIQVM
ELRDIPKKGPNQGVGLKNAHMRPGNNNRHWTNGRR
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Identical sequences K4D2Y0
Solyc10g080930.1.1 XP_004249321.1.44838 Sopim10g080930.0.1 Solyc10g080930.1.1

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