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  Home > Genomes > NCBI 2017_08 genome > XP_004431336.1.5094

Domain assignment for XP_004431336.1.5094 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

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Strong hits

Sequence:  XP_004431336.1.5094
Domain Number 1 Region: 1587-1695
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 5.36e-34
Family Spermadhesin, CUB domain 0.00028
Further Details:      
 
Domain Number 2 Region: 888-1003
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.7e-33
Family Spermadhesin, CUB domain 0.00053
Further Details:      
 
Domain Number 3 Region: 241-343
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 5.63e-33
Family Spermadhesin, CUB domain 0.0007
Further Details:      
 
Domain Number 4 Region: 1938-2047
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.4e-32
Family Spermadhesin, CUB domain 0.00046
Further Details:      
 
Domain Number 5 Region: 715-834
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.53e-32
Family Spermadhesin, CUB domain 0.00058
Further Details:      
 
Domain Number 6 Region: 2105-2225
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.06e-31
Family Spermadhesin, CUB domain 0.00073
Further Details:      
 
Domain Number 7 Region: 2276-2395
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.36e-31
Family Spermadhesin, CUB domain 0.00097
Further Details:      
 
Domain Number 8 Region: 65-171
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.22e-29
Family Spermadhesin, CUB domain 0.00043
Further Details:      
 
Domain Number 9 Region: 1407-1523
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.96e-28
Family Spermadhesin, CUB domain 0.0007
Further Details:      
 
Domain Number 10 Region: 548-658
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.75e-27
Family Spermadhesin, CUB domain 0.001
Further Details:      
 
Domain Number 11 Region: 2464-2568
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.53e-26
Family Spermadhesin, CUB domain 0.0014
Further Details:      
 
Domain Number 12 Region: 1067-1176
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.09e-25
Family Spermadhesin, CUB domain 0.0011
Further Details:      
 
Domain Number 13 Region: 1240-1349
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.88e-25
Family Spermadhesin, CUB domain 0.001
Further Details:      
 
Domain Number 14 Region: 1755-1870
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.57e-24
Family Spermadhesin, CUB domain 0.0043
Further Details:      
 
Domain Number 15 Region: 3171-3242
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 3.1e-21
Family Complement control module/SCR domain 0.00092
Further Details:      
 
Domain Number 16 Region: 2816-2884
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 7.15e-19
Family Complement control module/SCR domain 0.00085
Further Details:      
 
Domain Number 17 Region: 3112-3182
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 7.23e-18
Family Complement control module/SCR domain 0.0012
Further Details:      
 
Domain Number 18 Region: 2873-2940
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 7.96e-18
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 19 Region: 3055-3123
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.21e-17
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 20 Region: 2931-3004
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.62e-17
Family Complement control module/SCR domain 0.00084
Further Details:      
 
Domain Number 21 Region: 3231-3300
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.05e-16
Family Complement control module/SCR domain 0.00098
Further Details:      
 
Domain Number 22 Region: 485-556
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000153
Family Complement control module/SCR domain 0.0016
Further Details:      
 
Domain Number 23 Region: 2223-2292
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000189
Family Complement control module/SCR domain 0.00094
Further Details:      
 
Domain Number 24 Region: 2630-2697
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000222
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 25 Region: 2987-3048
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000306
Family Complement control module/SCR domain 0.00093
Further Details:      
 
Domain Number 26 Region: 3290-3346
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000334
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 27 Region: 3351-3419
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000347
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 28 Region: 2757-2818
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000403
Family Complement control module/SCR domain 0.0017
Further Details:      
 
Domain Number 29 Region: 2568-2641
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000181
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 30 Region: 1009-1069
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000378
Family Complement control module/SCR domain 0.0021
Further Details:      
 
Domain Number 31 Region: 2051-2113
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000378
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 32 Region: 1527-1591
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000432
Family Complement control module/SCR domain 0.0016
Further Details:      
 
Domain Number 33 Region: 1700-1765
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000001
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 34 Region: 663-722
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000139
Family Complement control module/SCR domain 0.0017
Further Details:      
 
Domain Number 35 Region: 1877-1943
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000032
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 36 Region: 177-238
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000378
Family Complement control module/SCR domain 0.00084
Further Details:      
 
Domain Number 37 Region: 1182-1244
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000756
Family Complement control module/SCR domain 0.0017
Further Details:      
 
Domain Number 38 Region: 1353-1415
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000133
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 39 Region: 3410-3468
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000195
Family Complement control module/SCR domain 0.0026
Further Details:      
 
Domain Number 40 Region: 834-901
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000337
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 41 Region: 2702-2764
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000375
Family Complement control module/SCR domain 0.0021
Further Details:      
 
Domain Number 42 Region: 2394-2457
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000702
Family Complement control module/SCR domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004431336.1.5094
Sequence length 3707
Comment PREDICTED: CUB and sushi domain-containing protein 3 isoform X1 [Ceratotherium simum simum]; AA=GCF_000283155.1; RF=representative genome; TAX=73337; STAX=9807; NAME=Ceratotherium simum simum; AL=Scaffold; RT=Major
Sequence 
MKGIRKGESRAKESKPREPDTRRCAKCGRLDFILMKKMGIKSGFTFWNLVFLLTVSCVKG
FIYTCGGTLKGLNGTIESPGFPYGYPNGANCTWVIIAEERNRIQIVFQSFALEEEYDYLS
LYDGHPHPTNFRTRLTGFHLPPPVTSTKSVFSLRLTSDFAVSAHGFKVYYEELQSSSCGN
PGVPPKGVLYGTRFDVGDKIRYSCVTGYILDGHPQLTCLANSVNTASWDFPVPICRAEDA
CGGTMRGSSGIISSPGFPNEYHNNADCTWTIVAEPGDTISLIFTDFQMEEKYDYLEIEGS
EPPTIWLSGMNIPPPIISNKNWLRLHFVTDSNHRYRGFSAPYQGSSTLTHTTSTGELEEH
NRTTTGAIAVASTSADVTVSSVTAVTIRRLSEEQRVQVTNLRNSGPDPNTSKDGLSPHEA
DTQSTRRRPRNAEQIERTKELAVVTHRVKKAIDFKSRGFKLFPGKDNSNKFSILNEGGIK
TASNLCPDPGEPENGKRIGSDFSLGSTVQFSCDEDYVLQGAKSITCQRIAEVFAAWSDHR
PVCKVKTCGSNLQGPSGTFTSPNFPFQYDSNAQCVWVITAVNTNKVIQINFEEFDLEIGY
DTLTIGDGGEVGDPRTVLQVLTGSFVPDLIVSMSSQMWLHLQTDESVGSVGFKVNYKEIE
KESCGDPGTPLYGIREGDGFSNRDVLRFECQFGFELIGEKSIVCQENNQWSANIPICIFP
CLSNFTAPMGTVLSPDYPEGYGNNLNCIWTIISDPGSRIHLSFNDFDLESQFDFLAVKDG
DSPDSPILGTFTGAEVPSHLTSNSHILRLEFQADHSMSGRGFNITYNTFGHNECPDPGIP
INARRFGDNFQLGSSISVICEEGFIKTQGTETITCILMDGKVMWSGPIPRCGAPCGGHFS
APSGLILSPGWPGYYKDSLNCEWVIEAEPGHSIKITFERFQTELNYDVLEVHDGPNLLSP
LLGSYNGTQVPQFLFSSSNFIYLLFTTDNSRSNNGFKIHYESVTVNTYSCLDPGIPVHGR
RYGHDFSIGSTVSFSCDPGYRLSHEEPLLCEKNHWWSHPLPTCDALCGGDVRGPSGTILS
PGYPEFYPNSLNCTWTVDVTHGKGVQFNFHTFHLEDHHDYLLITENGSFTQPLARLTGSE
LPSTINAGLYGNFRAQLRFISDFSISYEGFNITFSEYNLEPCEDPGIPQYGSRIGFNFGV
GDTLTFSCSLGYRLEGTSEIICLGGGRRVWSAPLPRCVAECGASATNNEGILLSPNYPLN
YENNHECIYSIQVQAGKGINISARTFHLAQGDVLKIYDGKDKTTHLLGAFTGASMRGLTL
SSTSNQLWLEFNSDSEGTDEGFQLVYTSFELSHCEDPGIPQFGYKISDQGHFAGSTIIYG
CNPGYTLHGSSLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNNLR
CVWMIEVDPGNIVSLQFLAFDTEASHDILRVWDGPPENEMLLKEISGSLVPEGIHSTLNI
VTIQFDTDFYISKSGFAIQFSSSVATACRDPGVPMNGTRNGDGREPGDTVVFQCDPGYEL
QGEERITCIQVENRYFWQPSPPVCIAPCGGNLTGSSGFILSPNFPHPYPHSRDCDWTVAV
NADYVISLAFISFSIEPNYDFLYIYDGPDSNSPLIGSFQDSKLPERIESSSNTMHLAFRS
DGSVSYTGFHLEYKAKLRESCFDPGNIMNGTRLGMDYKLGSTVTYYCDAGYVLQGYSTLT
CIMGDDGRPGWNRALPSCHAPCGSRSTGSEGTVLSPNYPKNYSVGHNCVYSIAVPKEFVV
FGQFVFFQTSLHDVVEVYDGPTQQSSLLSSLSGSHSGESLPLSSGNQITIRFTSVGPITA
KGFHFVYQAVPRTSSTQCSSVPEPRFGRRIGNEFAVGSLVLFECNPGYILHGSIAIRCDT
VPNSLAQWNDSLPTCIVPCGGILTKRKGTILSPGYPEPYDNNLNCVWKITVPEGAGIQVQ
VVSFATEHNWDSLDFYDGGDNNAPRLGSYSGTTIPHLLNSTSNNLYLNFQSDISVSAAGF
HLEYTAIGLDSCPEPQTPSSGIKIGDRYMVGDVVSFQCDHGYSLQGHSHITCMPGPVRRW
NYPIPICLAQCGGAMSDFSGVILSPGFPGNYPSSLDCTWTIKLPIGFGVHLQFVNFSTET
IHDYLEVRSGSSETSTVIGRLSGPQIPSSLFSTTHETSLYFHSDYSQNKQGFHIVYQAYQ
LQSCPDPRPFRNGFVIGNDFTVGQTISFECFPGYTLIGNSALTCLHGVSRNWNHPLPRCE
ALCGGNITAMNGTIYSPGYPDEYPNFQDCFWLVRVPPGNGIYINFTVLQTEPIYDFITVW
DGPDQNSPQIGQFSGNTALESVYSTSNQILIKFHSDFTTSGFFVLSYHAYQLRVCQPPPP
VPNAEILTEDDEFEIGDIIRYQCLPGFTLVGNAILTCRLGERLQMDGAPPVCQVLCPANE
LRLDSTGVILSPGYPDSYPNLQMCAWSISVEKGYNISMFVEFFQTEKEFDVLQVYDGPNI
QSPVLISLSGDYSSAFNITSNGHEVFLQWSADHGNNKKGFRIRYIAFYCSTPESPPHGYI
ISQTGGQLNSVVRWACDRGFRLVGKSSAVCRKSSYGYHAWDAPVPACQAISCGIPKAPTN
GGILTTDYLVGTRVTYFCNDGYRLSSKELTTAVCQSDGTWSNHNKTPRCVVVTCPSINSF
TLEHGRWRIVNGSHYEYKTKVVFSCDPGYHGLGPASIECLPNGTWSWRNERPYCQIISCG
ELPTPPNGNKIGTQISYGSTAIFTCDSGFMLVGSAVRECLSSGLWSGSETRCLAGHCGIP
ELIVNGQVIGENYGYRDTVVYQCNPGFRLIGSSVRICQQDHNWSGQLPSCVPVSCGHPGS
PIYGRTSGNGFNFNDVVTFSCNIGYLMQGPTKAQCQANRQWSHPPPVCKVVNCSDPGIQA
NSKRESKIEHGNFTYGTVVFYDCNPGYFLFGSSVLICQPNGQWDKPLPECIMIDCGHPGI
PPNAVLSGEKYTFGSTVHYSCTGKRTLLGQSSRTCQLNGHWSGSQPHCSGDATGTCGDPG
TPGHGSRQESDFRTKSSVHFSCDTGYILHGSEERICLANGSWTGSQPECKAVQCGNPGTT
ANGKVFQIDGTTFSSSVIYSCTEGYILSGPSVRQCTANGTWSGTLPNCTIISCGDPGIPA
NGLRYGDDYVVGQNVSYMCQPGYIMELNGSRIRTCTTNGTWSGVMPTCRAVTCPAPPQIS
NGRLEGTNFDWGFSISYICSPGYELSFPAVLTCVGNGTWSGEVPQCLPKFCGDPGIPAQG
KREGKSFIYQSEVSFSCDSPFILVGSSTRICQADGTWSGSSPHCIEPTRTSCENPGVPRH
GSQNNTFGFQVGSVVQFHCKKGHLLQGSTTRTCLPDLTWSGIQPECIPHSCKQPETPAHA
NVVGMDLPSHGYTLIYTCQPGFFLAGGTEHRVCRSDNTWTGKVPVCEAGSKTLVKDPRPA
LGTPSPKLSVPDDVFAENYIWKGSFNFKGKKQPMTLTVTSFNASTGRVNATLSNSNMELL
LSGIYKSQEARLMLHIYLIKVPTHASVKKMKEENWAMDGFVSAEPDGATYVFQGFIQGKD
YGQFGLQRLGLNMSEGSNSSNQPHGTNSSSVAIAILVPFFALIFAGFGFYLYKQRTAPKT
QYTGCSVHENNNGQAAFENPMYDTNAKSVEGKAVRFDPNLNTVCTMV
Download sequence
Identical sequences XP_004431336.1.5094

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.