SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_004525441.1.71379 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_004525441.1.71379
Domain Number 1 Region: 379-598
Classification Level Classification E-value
Superfamily DBL homology domain (DH-domain) 6.15e-56
Family DBL homology domain (DH-domain) 0.00018
Further Details:      
 
Domain Number 2 Region: 71-189
Classification Level Classification E-value
Superfamily BRCT domain 2.47e-18
Family DNA-repair protein XRCC1 0.043
Further Details:      
 
Domain Number 3 Region: 170-293
Classification Level Classification E-value
Superfamily BRCT domain 3.63e-17
Family DNA topoisomerase II binding protein 1, TopBP1 0.027
Further Details:      
 
Weak hits

Sequence:  XP_004525441.1.71379
Domain Number - Region: 590-706
Classification Level Classification E-value
Superfamily PH domain-like 0.000369
Family Pleckstrin-homology domain (PH domain) 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004525441.1.71379
Sequence length 859
Comment protein ECT2 isoform X2 [Ceratitis capitata]; AA=GCF_000347755.2; RF=representative genome; TAX=7213; STAX=7213; NAME=Ceratitis capitata; AL=Scaffold; RT=Minor
Sequence
METIDEQSKSEMSISPSPSPDNLRICLVGDIINDEETVEAARSFNVPVITSENGLDALND
FEWRTFFVLKDFEGPIYDAIHKNKQCIWGPPALKHAAESKDGLIRNARPVYNYSMRGVVT
CFTGIRKKDELTRLVNLIHSMGGCIRKDMNSKITHLICSHSGGDKYQYAKTFRLTVVRPA
WVYAAWERRDELQFRATTDDFSREHKLKAFEGQKICFFGFPTDEHQHMVDVLLSNGGVPA
ELDDPECSHVVVDEHTTQTKPEPKNHRTHILKSDWFWYTIQNGYADEMDYLFGDYLDSIA
NTPNTDRRDSLPISFNKRKRKRFSQRIQFEGTPIGSGKRRSSVSDAGLLSVSGSFFDCTT
SPDKLETGKLHNEVHIETPAVCETTPAKKSMRFNHFMDFFSTESNYVGILDTIVKLFKNP
LEEIAETNDALLNKSEIKSIFNNFLPIHEVHQSMLESLRAIQSKWSEDCLIGDIILQHRD
ELTKAYPPYVNFFEQMKETLQQCDSQNPRFHAFLKINQTKPECGRQSLQDLMIRPVQRLP
SISLLLNDILKHTNKNNPDYVKLELALKSIKEVMMHINEDKRKTESRMAIFDIFNDIEGC
PPHLVSSNRSFISKCEVTELSDNLSGRGDSLMLYLFSDTIEVCKKRSRAFNTAKSPSSTK
SHKHVKLISLNAIRFVIDITDSPRAFALLCRQDKEKLYSFTIADDETDKVVYLKLLCKQM
AENACRTDTVSALLSRTSQELEVDISDVNLSTLSKAFKLAARTRQKVGRAFSFNKTPSKL
KRAVSTMMTPPFGSTNSLTPASQLAQMRLASCANIHEAVDEEGNRSSSPSTQSEILLPPL
SVQPMRKNKSSTLGVVGRL
Download sequence
Identical sequences W8BL03
XP_004525441.1.71379

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]