SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_004592685.1.84141 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_004592685.1.84141
Domain Number 1 Region: 1-83
Classification Level Classification E-value
Superfamily Ubiquitin-like 1.07e-30
Family Ras-binding domain, RBD 0.00000526
Further Details:      
 
Weak hits

Sequence:  XP_004592685.1.84141
Domain Number - Region: 148-347
Classification Level Classification E-value
Superfamily Tropomyosin 0.0582
Family Tropomyosin 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004592685.1.84141
Sequence length 419
Comment PREDICTED: ras association domain-containing protein 8 [Ochotona princeps]; AA=GCF_000292845.1; RF=representative genome; TAX=9978; STAX=9978; NAME=Ochotona princeps; AL=Scaffold; RT=Major
Sequence
MELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRTGRYTLIEKWRDTERHLAPHENPI
ISLNKWGQYASDVQLILRRTGPSLSERPTSDSVARIPERTLYRQSLPPLAKLRPQIDKSI
KRREPKRKSLTFTGGAKGLMDIFGKGKETEFKQRVLNNCKTSADELKKLIRLQTEKLQSI
EKQLESNDIEIRFWEQKYSSSLEEEIVRLEQKIKRNDVEIEEEEFWENELQIEQENEKQL
KDQLQEIRQKIADCENKLKDYLAQIQTMESGLEAEKLQREVQEAQVNEEEVKGKIGKVRG
EIDVQGQQSLRLENGIKAVERSLGQATKRLQDKEQELEQLTKELRQVNLQQFIQQTGTKV
TVLPAEPIEIEASHTDIDREPTFQSGSLKRPGSSRQLPSNLRILQSPVSSGFNPEGIYV
Download sequence
Identical sequences ENSOPRP00000008791 ENSOPRP00000008791 XP_004592685.1.84141

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]