SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_004609126.2.94378 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_004609126.2.94378
Domain Number 1 Region: 15-122
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.79e-31
Family Spermadhesin, CUB domain 0.00039
Further Details:      
 
Domain Number 2 Region: 144-319
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.0000000000000407
Family Pentraxin (pentaxin) 0.0084
Further Details:      
 
Domain Number 3 Region: 835-1115
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 0.000000000000146
Family Rhodopsin-like 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004609126.2.94378
Sequence length 1225
Comment PREDICTED: G-protein coupled receptor 126 isoform X1 [Sorex araneus]; AA=GCF_000181275.1; RF=representative genome; TAX=42254; STAX=42254; NAME=Sorex araneus; AL=Scaffold; RT=Major
Sequence
MPVMCIWHTVLGCANCRVVLSSPSGTFTSPCYPNDYPNSQACMWTLRAPTGYIIQITFND
FDIEEAPNCIYDSLSLDNGESQTKFCGATAKGLSFNSSANEMHVSFSSDFSIPKKGFNAS
YIRVAVSLRNQKVILPQTLDAYQVSVAKSVSIPELSAFTLCFEATKVGKDDNEWTAFSYS
DASLTPLLSFGKDKSGYFLFISGSKCLLNSVLPVKDKEDIFTESFEQLCLVWNNSLGSVG
VNFKRTYEAFPCDSTISKVIPGNGKLLLGSNQNEIASLKGDIYNFRLWNSTMNSKILSNL
SCNVKGNVVDWQNEFWNIPTLALKAESNLSCGSYLIPLPAAELASCADLGTLCQASVNSP
STTPRTVTTNIPVTNRTDRQRNDGILYRISVVIQNLLRHPEVKVQSKVAEWLNSTFQNWN
YTVYVVNISFHLNTGEDKIKVKRSIVDDQRLMIWALLVYNATSNPTLEGNIIQQKLLKSN
ESLDEGLRLYTVNVRPLGICFAQENPPGYLWPMIPPSLYLQECKQKNGFFASRTCHLNSA
NASIAFWDPPDLSNCSREANEVANEILNLTSDGQTLNSANISSIVEQVKRIVNKEENIDI
TLGSTLMTIFSNILTSSDSDLLDSSSEALKTIDELAFKIDLNSTSHVNITTRNLALGVSS
LSPKTNEISNFSIGLPSNNDSYFQMDFENGQMDSLASVILPPNLLDHLSQEDSELVKRAQ
FTFFNKTGLFQDVGTKQGSLVSYVMACSIGNITIQDLKDPVQIKIKHMRTQPVPHSICAF
WDLNKNEGSGFWNTSGCVAQRDLEAPETICLCNHLTHFGVLMDLQGTASQIDARNTKVLT
FITYIGCGISAIFSAATLLTYVAFEKLRRDYPSKILMNLCTALLFLNLIFLLDGWITSFE
VVGLCTAVAALLHFFLLATFTWMGLEAIHMYIALVKVFNTYIRRYILKFCLIGWGLPALV
VSIVLASRNQNEVYGRRSYGKEQSDEFCWIQDPVVFYVTCAGYFGVMFFLNVAMFIVVMV
QICGRNGKRSNRTLRDEVLRNLRSVVSLTFLLGMTWGFAFFAWGPLNIPFIYLFAIFNSL
QGMFIFVFHCAMKENVQKQWRRHLCCGRFRLADNSDWSKTATNIIKKSSDNLGKSLSSSS
IGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSSSKLTRADGEQTSIIPVHQVIDKVKG
YCSAHSDNFYKNIIMSDTFSHSTKF
Download sequence
Identical sequences XP_004609126.2.94378

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]