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Domain assignment for XP_004617627.1.94378 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004617627.1.94378
Domain Number 1 Region: 471-528
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.4e-26
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 2 Region: 359-416
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.82e-26
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 3 Region: 303-360
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.59e-24
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 4 Region: 247-304
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.24e-24
Family Classic zinc finger, C2H2 0.0033
Further Details:      
 
Domain Number 5 Region: 415-472
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.5e-22
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 6 Region: 545-597
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.82e-21
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 7 Region: 68-131
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 9.16e-21
Family SCAN domain 0.00033
Further Details:      
 
Domain Number 8 Region: 209-261
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.64e-20
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004617627.1.94378
Sequence length 603
Comment PREDICTED: zinc finger and SCAN domain-containing protein 2 isoform X1 [Sorex araneus]; AA=GCF_000181275.1; RF=representative genome; TAX=42254; STAX=42254; NAME=Sorex araneus; AL=Scaffold; RT=Major
Sequence
MMAAEVPSMTTSLNLLVQAPQENEQEMVTTTMLEDDSWVQEAILQEDGLESEPFPHSARK
GGSQEEVTGGPPGALGRLRELCRRWLRPEVHTKEQMLTVLPREIQAWLQEHRPESSEEAA
ALVEDLTQSLRDGDFEIPSENGENVQDTFEDVSEGEVTQQSDWESDMERYCGLRSPQGNT
PGVGHREGRSQGKEAGQLIGLQGTYLGEKPYECPQCGKTFSRKSHLITHERTHTGEKYYK
CDECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRIHTGEKPFQCAEC
GKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYECKECGESF
SYNSNLIRHQRIHTGERPYKCPDCGQRFSQSSALITHRRTHTGEKPYQCGECGKSFSRSS
NLATHRRTHMVEKPYKCGECGKSFSQSSSLIAHQGMHTGEKPYECLTCGESFSWSSNLIK
HQRIHTGEKPYKCSECGKCFSQRSQLVVHQRTHTGEKPYKCLMCGKSFSRGSILVMHQRA
HLGDKPYRCPECGKGFSWNSVLIIHQRIHTGEKPYKCPECGKGFSNSSNFITHQRTHMKE
KLF
Download sequence
Identical sequences ENSSARP00000013000 ENSSARP00000013000 XP_004617627.1.94378

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