SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_004758888.1.14098 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_004758888.1.14098
Domain Number 1 Region: 3-111,168-193
Classification Level Classification E-value
Superfamily Chromo domain-like 2.2e-24
Family Chromo barrel domain 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004758888.1.14098
Sequence length 522
Comment PREDICTED: male-specific lethal 3 homolog [Mustela putorius furo]; AA=GCF_000215625.1; RF=representative genome; TAX=9669; STAX=9668; NAME=Mustela putorius furo; breed=Sable; AL=Scaffold; RT=Major
Sequence
MSASEGMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWN
RSWDRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKRCRLPGVDSVLKSLPVEE
KDENDENSISSSSADSSEEKDEEISEESDIEEKTEVKEEPELHTKREMEERTITIEIPEV
LKKKLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHAMPHAN
MNVHYIPAEKNVDLCKEMVDGVRITFDYTLPLLLLYPYEQVQYKKVTSSKFFLPIKESAT
NTNRNQEELSPSPPLLNPSTPQSTESQPATGEPATPKRRKAEPEALQSLRRSTRHSANCD
RLSESSASPQPKRRQQDTPSSMPKLFLHLEKKTPVHSRSSSPVPLTPSKEGSAVFAGFEG
RRTNEINEVLSWKLVPDSYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKA
LLKHFDLFLRFLAEYHDDFFPESAYVAACEAHYSTKNPRAIY
Download sequence
Identical sequences M3XTW6
XP_004758888.1.14098 ENSMPUP00000002516 ENSMPUP00000002516

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]