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Domain assignment for XP_004765841.1.14098 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004765841.1.14098
Domain Number 1 Region: 6-91
Classification Level Classification E-value
Superfamily PDZ domain-like 1.45e-20
Family PDZ domain 0.0000454
Further Details:      
 
Domain Number 2 Region: 617-681
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.87e-18
Family LIM domain 0.0095
Further Details:      
 
Domain Number 3 Region: 558-621
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 5.16e-18
Family LIM domain 0.01
Further Details:      
 
Domain Number 4 Region: 526-556
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000158
Family LIM domain 0.0016
Further Details:      
 
Domain Number 5 Region: 677-701
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000212
Family LIM domain 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004765841.1.14098
Sequence length 708
Comment PREDICTED: LIM domain-binding protein 3 isoform X6 [Mustela putorius furo]; AA=GCF_000215625.1; RF=representative genome; TAX=9669; STAX=9668; NAME=Mustela putorius furo; breed=Sable; AL=Scaffold; RT=Major
Sequence
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQSPLPVIPHQKDPARDTNGSPAAL
SPNPEARASLGTPGTPELRHTFSSFSQTSVFSSHTEASEPGPPRGSPGAKTSLEGALDSF
SPKAPQGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGAGLPGGSLPIKDLAVDS
ASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTP
IAHAPVCTSQAATPLLPASAQPPAAAPPGAASPPLSAATAHAATASAAAPASSPADSPRP
QASAYSPAKATSPAPATHTYNEASAAPAPKPRVVTTASIRPSVYQPVPVSTYSPSPGGNY
SPAPYTPSPAPTYSPSPAPSYTPSPAPSYNPAPSAAAYSGGPVESASRPPWVSDDSFSQK
FAPGKSTTSISKQTLPRGTPAYTPVGPQVSPLARGIVQRAERFPASSRTPLCGHCNNVIR
GPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIMG
EVMHALKQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCHGCDFPVEAG
DKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHAHAINV
Download sequence
Identical sequences M3YBH2
ENSMPUP00000008679 XP_004765841.1.14098 ENSMPUP00000008679

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