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Domain assignment for XP_004839985.1.39548 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004839985.1.39548
Domain Number 1 Region: 291-492
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 1.25e-55
Family DNA polymerase beta-like 0.0000103
Further Details:      
 
Domain Number 2 Region: 137-227
Classification Level Classification E-value
Superfamily DNA polymerase beta, N-terminal domain-like 8.24e-23
Family DNA polymerase beta, N-terminal domain-like 0.00033
Further Details:      
 
Domain Number 3 Region: 230-287
Classification Level Classification E-value
Superfamily PsbU/PolX domain-like 1.44e-17
Family DNA polymerase beta-like, second domain 0.00049
Further Details:      
 
Domain Number 4 Region: 31-122
Classification Level Classification E-value
Superfamily BRCT domain 0.00000000149
Family DNA topoisomerase II binding protein 1, TopBP1 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004839985.1.39548
Sequence length 493
Comment PREDICTED: DNA-directed DNA/RNA polymerase mu isoform X1 [Heterocephalus glaber]; AA=GCF_000247695.1; RF=representative genome; TAX=10181; STAX=10181; NAME=Heterocephalus glaber; AL=Scaffold; RT=Major
Sequence
MLPKRRRVRARSPGGPAASSTSSSALFPGVAIYLAEPRMGRSRRAFLTRLAMSKGFRVLD
TYSSEVTHVVMEGTSAGEAACWQENEAAPPPGCPRPALLDISWFTESMAAGQPVPVEGRH
RLEEAELRKGPPNPAAMPAYACQRSTPLMHHNSSLSEALETLAEAAGFEGSEGRLLSFCR
AASVLRALPWPVTVLSQLQGLPNFGEHSSRIVQELLERGVCEEVKRVRSSERYRTMKLFT
QVFGVGVKTANRWYQEGLRTLDELREQPQRLTRQQRAGLQHHRDLCTPVGRPDAEALQRL
VEATVGQALPGATVMLTGGFRRGKLQGHDVDFLITHPEEGREVGLLPSVVCQLQSQGLVL
YHQHQRSHLGDPDHLARQSHTMDAFERSLCILRLLQPSQPAKGADSEPRPWRAVRVDLVV
APWSQFPFALLGWTGSKLFERDLRRFSRKEKGLCLNSHGLFDPEQKSCFHVASEEDIFRH
LGLAYLPPEQRNA
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Identical sequences G5ASQ9
HGL_H00000379174 XP_004839985.1.39548

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