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Domain assignment for XP_004840486.1.39548 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004840486.1.39548
Domain Number 1 Region: 154-216
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.28e-24
Family KRAB domain (Kruppel-associated box) 0.0013
Further Details:      
 
Domain Number 2 Region: 384-440
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.9e-22
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 3 Region: 837-893
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.95e-21
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 4 Region: 724-781
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.28e-20
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 5 Region: 440-496
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.47e-20
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 6 Region: 781-837
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.23e-19
Family Classic zinc finger, C2H2 0.0084
Further Details:      
 
Domain Number 7 Region: 878-930
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.23e-19
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 8 Region: 687-738
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000122
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 9 Region: 348-397
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000195
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004840486.1.39548
Sequence length 1000
Comment PREDICTED: zinc finger protein 316 isoform X2 [Heterocephalus glaber]; AA=GCF_000247695.1; RF=representative genome; TAX=10181; STAX=10181; NAME=Heterocephalus glaber; AL=Scaffold; RT=Major
Sequence
MAALQTTLDSPAPQLERVEDGSECDPDQEEEEEKGKDVEEVEEEEEEEEEAEDTAEVVEV
AEVEVEAEFDGDDDSDGDDDDDDNDDEEDGVEEVLAEEQSPGLGAQEQLSHGGDARSPAL
GKALQMCQVPVTTQDEDLEEEEEEEEEEEDFLTAGSQGLVTFEDVAVYFSLEEWERLDVN
QRALYQEVMQENYGILVSLGYPVPKPELIFRLEQGEEPWVPDSPHPEEGDIVTGVYTGAW
YWTDDMEDHEEEDDEDFLAEMAEEENEPPGLWSAAYGVGDVPGTWGPDDSDSAQTPEGWG
SDSGNLGVLAEESEAKPFLPGQEPDSNLMAPWPYPTEEAAPTGRPETTCDVCGKVFPHRS
RLAKHQRYHAAVKPFGCEECGKGFVYRSHLAIHQRTHTGEKPFPCPDCGKRFVYKSHLVT
HRRIHTGERPYRCAFCGAGFGRRSYLVTHQRTHTGERPYPCAHCGRSFSQSSALARHQAV
HTADRPHCCPDCGQAFRLRADFQRHRRSGGCAEPGSEGPRREPCEAATAMGLKEPETALE
GPEEPQQSVSADRDPEAEAREEAAAAEARPESKQDPEPSRRFLGMDNGLGEGEGPSSHPL
GFHFPMHPKSWLHPDGFPILGLTDIGDRVPADGRALPGPLGAPLALAEGAGLARDPGAGL
GLRVFAPAVGGLLAEPAPAALAEEESPWICSDCGKTFGRRAALAKHQRYHAGERPHRCAD
CGKSFVYGSHLARHRRTHTGERPFPCPECGARFARGSHLAAHVRGHTGEKPFVCGVCGAG
FSRRAHLTAHGRAHTGERPYACAECGRRFGQSAALTRHQWAHAEEKPHRCPDCGKGFGHS
SDFKRHRRTHTGEKPFRCADCGRGFAQRSNLAKHRRGHTGERPFPCPECGKRFSQRSVLV
THQRTHTGERPYACAHCGRRFSQSSHLLTHMKTHRGAVGAPGQAGATVTPMPKAEAPARG
QLSAGSAPRECGSTLLEFAGGTSFGSEAAFAGPSAAYEES
Download sequence
Identical sequences XP_004840486.1.39548

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