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Domain assignment for XP_004940496.1.86415 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004940496.1.86415
Domain Number 1 Region: 732-862
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 1.19e-31
Family Synaptotagmin-like (S variant) 0.00000226
Further Details:      
 
Domain Number 2 Region: 1211-1331
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 9.67e-25
Family Synaptotagmin-like (S variant) 0.0069
Further Details:      
 
Domain Number 3 Region: 26-175
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 9.21e-22
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0025
Further Details:      
 
Domain Number 4 Region: 567-694
Classification Level Classification E-value
Superfamily PDZ domain-like 1.58e-19
Family PDZ domain 0.0000167
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004940496.1.86415
Sequence length 1360
Comment PREDICTED: regulating synaptic membrane exocytosis protein 1 isoform X24 [Gallus gallus]; AA=GCF_000002315.4; RF=representative genome; TAX=9031; STAX=9031; NAME=Gallus gallus; breed=Red Jungle fowl, inbred line UCD001; AL=Chromosome; RT=Major
Sequence
MSSSAGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKRLHQQ
FESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVYRNTVPTHCGSPVPVRVMWVCNLCRKQQEILTKSGAWFFGSGPQPSPSQD
GTLSDTATGASSDAPREKKARLQERSRSQTPLSTAAASSQEISPSSVQSDRRKGAEVSQP
AMGLDQKQVSSRSRSEPPRERKKTLVSDQNGKVVKSERKRVPKTSLQKEGPADDRERKER
HENRRLEKGKSQDYPDLPEKLEEGKVPDDEKQKKEDEYHTRYRSDPNLARYPVKPHPEEQ
QMRMHAKVSKARHERRHSDVALPHTEMEEAEVPENNLGKRSQLQGTQDRKSLVETQRSYS
IDRTGDVRISVSKQLTNHSPPTPRHSPVPIEHVEYKNHDTFKKQSRLDPSSAILMRKAKR
EKMETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKKRQMSVSSSEEEGASTPEYTSCEDV
EIESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMP
KESGALLGLKVVGGKMTELGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATN
EEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISP
TSPGALRDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPD
RSDKSKRRTKTVKKSLEPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEI
LIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHVHGGESSSKKLQRSRPISDSD
ISDYDVDDGIGVVPPVGYRSSTRESRSTTLTVPEQQRTTHHRSRSVSPHRGDDQGRTRSR
LPNVPSQRSLDEIHQMRRSRSPTRHHEASRSPADYRSRDMDSQYLSDQESELLMLPRAKR
GRSAECLHTISELQPSLDRARSASTNCLRPDTSLHSPERERQSRKVERYSSQKQTRKGSA
AETERIHQQGSPTQSPPADTSFSSRRGRQLPQVPVRSGSIEQEAGNKKLKSTIQRSTETG
MAAEMRSRMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLDGLGPAQLVGRQ
TLATPAMGDIQIGMVDKKGQLEVEVIRARGLTQKPGSKSTPAPYVKVYLLENGACIAKKK
TRIARKTLDPLYQQTLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSVV
IGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
Download sequence
Identical sequences XP_004940496.1.86415

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