SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for XP_004982785.1.39314 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  XP_004982785.1.39314
Domain Number 1 Region: 4-137
Classification Level Classification E-value
Superfamily Thioredoxin-like 1.2e-35
Family spliceosomal protein U5-15Kd 0.000000878
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004982785.1.39314
Sequence length 142
Comment PREDICTED: thioredoxin-like protein YLS8 [Setaria italica]; AA=GCF_000263155.2; RF=representative genome; TAX=4555; STAX=4555; NAME=Setaria italica; strain=Yugu1; AL=Chromosome; RT=Major
Download sequence
Identical sequences A0A0D3HEX9 A0A0D9XKV4 A0A0E0EZ61 A0A0E0FFX0 A0A0E0M906 A0A0E0R0M1 A0A1E5VL61 B6T4C6 B8B881 C5YKW0 I1Q8W5 J3MJB5 K4AGE3 Q7X873
ONIVA01G02590.2 GRMZM2G108277_P01 Pavirv00014263m|PACid:23799923 OB07G14970.1 NP_001148867.1.34533 XP_002436726.1.57931 XP_002444330.1.57931 XP_004982785.1.39314 XP_006657540.1.55871 XP_015612821.1.37577 XP_015646995.1.37577 Si037950m|PACid:19679687 LOC_Os10g34520.1|PACid:21886447 OBART10G13860.1 jgi|Sorbi1|5058721|Sb07g020280 jgi|Sorbi1|5061525|Sb10g007680 OMERI07G05290.1 OMERI10G10380.1 OPUNC10G12310.1 OPUNC10G12320.1 ORGLA07G0055700.1 OsIBCD022672 LOC_Os10g34520.1|13110.m03073|protein 39946.BGIOSIBCE024080 39947.LOC_Os10g34520.1 4558.Sb07g020280.1 4558.Sb10g007680.1 GRMZM2G108277_T01|PACid:20866416

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]