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Domain assignment for XP_004988905.1.12839 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004988905.1.12839
Domain Number 1 Region: 337-388
Classification Level Classification E-value
Superfamily Fibrinogen C-terminal domain-like 0.0000000000718
Family Fibrinogen C-terminal domain-like 0.0012
Further Details:      
 
Domain Number 2 Region: 76-130
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000778
Family Complement control module/SCR domain 0.0047
Further Details:      
 
Weak hits

Sequence:  XP_004988905.1.12839
Domain Number - Region: 140-177
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00193
Family EGF-type module 0.016
Further Details:      
 
Domain Number - Region: 275-334
Classification Level Classification E-value
Superfamily Colicin Ia, N-terminal domain 0.0772
Family Colicin Ia, N-terminal domain 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004988905.1.12839
Sequence length 560
Comment hypothetical protein PTSG_09992 [Salpingoeca rosetta]; AA=GCF_000188695.1; RF=representative genome; TAX=946362; STAX=946362; NAME=Salpingoeca rosetta; strain=ATCC 50818; AL=Scaffold; RT=Major
Sequence
MRLVVRWLLLLCVLVVVAPAQVAVVSAAGDSAACVALGAASSCVELNRNACSGAGAGSGD
CGSCFDGYAASNQSTTCFPVSCGTPQPTSNANPESTSELFFGDTVTFSCNPGTRASGDAD
SYDVQCTADGTLEPVVSGQSCQDVDMCAGSPCGEQLCEETANGLDFICRCKPGFAGTADH
EGNGCFVPEMAVVDGTLEVLAEDVVLNLPEQPEFTSLRSLVQQLSTALETEVTTARDNES
RNQDNILALQQLLAELGANFTALNGRQEDTSAFAAALAQQITDERNRATAAENSISQAVN
GLAGDLNDLSGRVDNVAALPDEVQALRDELSQLKLLLVPKSCLDVKNINPSAQSGIYEIR
PAGFTRKATLDVYCDMETDGGGWTRTAHLNDQQITEFPVTDANAMVDASSLGYNSFSGLW
FNTQPTTQMLIHYAGGGGAAYGAGEHVRITWGDDPMTYGVYNNHRLQDCRNLEQNVAWSS
CQYSSHQDATWQSCSFSFTWGGLNNMYGGNQQYRVILGPTARHNGGGDCFWHNFGANTND
RNNANDWAGAPDKEGYIYFR
Download sequence
Identical sequences F2UP69
XP_004988905.1.12839 PTSG_09992T0

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