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Domain assignment for XP_004991862.1.12839 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004991862.1.12839
Domain Number 1 Region: 420-518
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000914
Family Cadherin 0.0092
Further Details:      
 
Domain Number 2 Region: 543-620
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000228
Family Cadherin 0.0071
Further Details:      
 
Domain Number 3 Region: 240-344
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000271
Family Cadherin 0.0064
Further Details:      
 
Domain Number 4 Region: 197-234
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000204
Family Cadherin 0.012
Further Details:      
 
Weak hits

Sequence:  XP_004991862.1.12839
Domain Number - Region: 745-838
Classification Level Classification E-value
Superfamily Cadherin-like 0.000754
Family Cadherin 0.0089
Further Details:      
 
Domain Number - Region: 340-389
Classification Level Classification E-value
Superfamily Cadherin-like 0.0236
Family Cadherin 0.0098
Further Details:      
 
Domain Number - Region: 640-725
Classification Level Classification E-value
Superfamily Cadherin-like 0.0357
Family Cadherin 0.013
Further Details:      
 
Domain Number - Region: 53-170
Classification Level Classification E-value
Superfamily Cadherin-like 0.0471
Family Cadherin 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004991862.1.12839
Sequence length 843
Comment hypothetical protein PTSG_06480 [Salpingoeca rosetta]; AA=GCF_000188695.1; RF=representative genome; TAX=946362; STAX=946362; NAME=Salpingoeca rosetta; strain=ATCC 50818; AL=Scaffold; RT=Major
Sequence
MLLVKSAVPLNHEANPVVTTSISSIDNNGAVVTSTFNISVADINEPPTDVVVHAINDTSQ
QLLQQFLVPEQPAHATTAAQPWLVGAVRVLDPDTADATADPHPFVFDVSPAGIAYIENQQ
LFVDRSALDFESQSSFVIINVTARDARDSSLAVSHQFTLLVQDLNESPSSVVPNGVSFHL
RACAPGHRGRLAHPGATLNYEVRSVFVVTVTATDQGGLSATSQILVSVQDRNDAPTTPTI
TSNRLPENTTALPFVVGTLQATDEDASQMLQFAIDSIDPPHVAPVFALDGAALVYDNTDS
PDVVVSHETTPTIAFTITVQDSGGPGDNDPPLSTTTDIVVRVVDSNDAPQGLVLINATAA
VPENAVAGTFVGTLAVTGEDMGETITFEILLGGEFLAVATPQPTACSGGAGLCTADVPPY
LLELSTSSVAENTPPGIPIATIVAFDEDRSGDEHTCQLLFGGDSALLSLLPPNTLTVAAG
MTVNFEERASLTFAVWCSDVNDGTVFATANLTLDVVDVQEPPTAVVFAASEPVPEVRSQA
IVLGTLSTIDEDAQDSTIFVLSDNDGGRLTIAQTNEVVILADAPLDFETQPARTFNVTAV
DLSGIPVSRQFTYEVADVNEPPTAPTITPTLGNGGDNSSDVTIIPVPETTAVGTVIATLA
STDPEGTPVSFVVGGQDSAFVAVDGASIVLATPVNFEGGSSSSSDARLFFWARASDGVND
SPTTHAGIAIGDVNEAPSSIVVSPTRVPENALPGAVTLSVTITDPDEDDSVVITGIATDP
ANINITIQTQPSCVSVSPQEGNNGTLAAGYTECSGAVLSLNQPFNYEQLPSFVLTLHAAV
PAL
Download sequence
Identical sequences F2UFX7
XP_004991862.1.12839 PTSG_06480T0

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