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Domain assignment for XP_004992331.1.12839 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004992331.1.12839
Domain Number 1 Region: 479-607
Classification Level Classification E-value
Superfamily C-type lectin-like 1.54e-19
Family C-type lectin domain 0.0071
Further Details:      
 
Domain Number 2 Region: 637-757
Classification Level Classification E-value
Superfamily C-type lectin-like 1.08e-18
Family C-type lectin domain 0.0038
Further Details:      
 
Weak hits

Sequence:  XP_004992331.1.12839
Domain Number - Region: 390-478
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0254
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004992331.1.12839
Sequence length 758
Comment hypothetical protein PTSG_06930 [Salpingoeca rosetta]; AA=GCF_000188695.1; RF=representative genome; TAX=946362; STAX=946362; NAME=Salpingoeca rosetta; strain=ATCC 50818; AL=Scaffold; RT=Major
Sequence
METYMHIKYSTTPKQFHLYFHVHIDVHIYLHLHVHVHIYLQLYVHLDLHLDGYVHEYFHL
TSTTTSTCTSTSTSTSTSTARSSSTGTSRLCDVHVDIHVHVHLHEYFHVHKHIYLYVDLH
LYFYFYFYFYFYLYFYFYFYFYFYFYFYVHKHVYLYVDLHIYLYFHVHIYLHLHVYVHVH
LHVHLYLHIHIHLHLHLHEYFHVHVHLHEYFHVHLHVHLDLHFHLHLYLYFYFHLHLYLY
VHLHEYFHVYFYFHVHLYLHEYFHVHVHIHFYFHLHLYLYVHLHEYFHVHLHVHLDLHLY
LHFYFHLHIYFHFHLHLYVHLHEYFHIYFHFHLHLHVHLDLHLYLHFYFHLHVYVHEYFH
VYLYFYLHVFVYLYVYLNDSGSGFVTFTSTSTSTSTSTSTSTSTSTSTSTSTSTSSSTST
STSTSTTTSSSTSTSSSTSSSSSTSSSSTTTSFTTTTTTTEALTFVDYFNEATNETEQWL
VGLSSTFFYVKDYRNQYGAEEQCQLRGGHLATISSQEELQLLMRYIFLHTRGRSVWLGAV
VNLDGSVEWQDGTEYDDSWAPWAENEPLLAELQGVRMKVWGVDDVDWFSHYQKRRLHYLC
ERDDASTSSSTVTSTTTATTTTPSVEIVNGLAQGPDSQYLYLDVPGNRDSAQVICATFSG
ALAVVGTGAEQEFVTRYLTSDSPPAFVWLGGRVDTSGTPTWDDGTPYDGSFVPWGVGEPR
SDTTSDRVITMLVTEGGNVIWTTTVDSDSRAILCEIPY
Download sequence
Identical sequences F2UF78
XP_004992331.1.12839 PTSG_06930T0

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