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Domain assignment for XP_004996042.1.12839 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004996042.1.12839
Domain Number 1 Region: 849-978
Classification Level Classification E-value
Superfamily C-type lectin-like 2.93e-31
Family C-type lectin domain 0.00088
Further Details:      
 
Domain Number 2 Region: 120-272
Classification Level Classification E-value
Superfamily C-type lectin-like 1.43e-26
Family C-type lectin domain 0.0023
Further Details:      
 
Domain Number 3 Region: 340-400
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000167
Family Complement control module/SCR domain 0.0047
Further Details:      
 
Domain Number 4 Region: 521-588
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000917
Family Complement control module/SCR domain 0.0049
Further Details:      
 
Domain Number 5 Region: 478-532
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000139
Family Complement control module/SCR domain 0.0049
Further Details:      
 
Domain Number 6 Region: 686-727
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000208
Family Complement control module/SCR domain 0.0038
Further Details:      
 
Domain Number 7 Region: 781-843
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000306
Family Complement control module/SCR domain 0.0039
Further Details:      
 
Domain Number 8 Region: 741-787
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000598
Family Complement control module/SCR domain 0.0036
Further Details:      
 
Domain Number 9 Region: 394-460
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000653
Family Complement control module/SCR domain 0.0035
Further Details:      
 
Weak hits

Sequence:  XP_004996042.1.12839
Domain Number - Region: 288-335
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00459
Family Complement control module/SCR domain 0.0097
Further Details:      
 
Domain Number - Region: 600-655
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.025
Family Complement control module/SCR domain 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004996042.1.12839
Sequence length 1198
Comment C-type MBL-2 protein [Salpingoeca rosetta]; AA=GCF_000188695.1; RF=representative genome; TAX=946362; STAX=946362; NAME=Salpingoeca rosetta; strain=ATCC 50818; AL=Scaffold; RT=Major
Sequence
MKLTAKIAVLFGGLFALASHTIASTPCDPSSDCCLTGFAQVTVEDFGLTTISAQSEGNCS
QAQGVVTILCVRDAVTGSCPHPLYDVSLAHASLTIVAPDGRAQNATCVSGPCDGHPVNVT
GVYRFADPAGWHYYEGSEYLFKDTSVDFDEARAFCQSLGADLPVVDTRQENEFIDSLTRD
LTESVWLGAHLLQDPLRVTWVDGSEGIAFENDTFYDDCTFGVDCLFQKNEPNNFNGEEFC
LSQGHPTKPGQSSGWNDADCSVRKSIVCERKILCSSRLGLDAMLQTDCVLPVPSGDQCNA
RCEAGFEPQNPVLITCSNEGILVGGPTCEPVDCGPVVTTLPANATADCSSLIDTRYKGQA
CEAQCDVGFELQGDPTFTCGTDGLWTASMTCNPVDCGPTPDLPNNTVADCSASTVYGGQP
CHAACAPGYETTQESEDGIYTCTADGEWVGEISCTRKDCGTTIADLPVNASANECGGDTA
FGGDDCEASCDAGYEPVSGTSTTFTCGTDGMWQGDLACQPVDCGSTITVTNGGATCSGST
VYTGDDCEASCDAGYEPVSGTSTTFTCGTDGMWQGDLACQPVDCGSLSDFISDAFASVNC
ASSTFTSTCSATCVPGYEPSPESNVSSTDSAVAEFTCGPFGSWQGALDCVHISCGSISDA
LADEFVTLASDSEECALDGNRCPAANVTCPPGYELSTGGSVHTMTCKIDGAWSESPTCQR
VSCGPFVPNLDPEAQQDACLDFRFGDVCEIGCRAGYVSNGDADQGVFTCDETGEWQGTLT
CDPVDCGPMPSGLPDNITSQCSNTKLGDTCELSCDAPFFTKGSNMFKCTEQGVWIGGCDL
ECLAFDVATQVGDSVFAFIETPMTFSKAQVNCLELGGNLASVSNDAENDAIFNLNPVIEA
RWLGGFVPEGDEHSAAAFQWVDGSSFNYTNWASGEPNDYLQKEDCTSMHTLSGRNALAGE
WNDVSCTAKIPSVCEINVAYHGADPYSCDAPFELAFSSEGFFNPGFRFSTAFEPSAQEFE
VTYSDTDSITAYSACSDHCLQNTACVGFYLQTQGDSFLCIGLNDLGYAQQTTVTSSSYAR
TGYPVPGTTSTTTTTTTTTSAYACTEYAGFTIEMVANADCQVPGDGDLVTSAYSNPLFHI
GTYADGEVDQCVSDCSSDSECLLFVVEYVDDEERCTTLRYLGIEEETGLRVVTYHKQQ
Download sequence
Identical sequences F2U591
XP_004996042.1.12839 PTSG_03456T0

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