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Domain assignment for XP_005047518.1.66865 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005047518.1.66865
Domain Number 1 Region: 80-360
Classification Level Classification E-value
Superfamily L domain-like 5.22e-53
Family Ngr ectodomain-like 0.00086
Further Details:      
 
Domain Number 2 Region: 418-518
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000133
Family Fibronectin type III 0.0038
Further Details:      
 
Weak hits

Sequence:  XP_005047518.1.66865
Domain Number - Region: 35-78
Classification Level Classification E-value
Superfamily L domain-like 0.000374
Family Ngr ectodomain-like 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005047518.1.66865
Sequence length 661
Comment PREDICTED: leucine-rich repeat transmembrane protein FLRT2 [Ficedula albicollis]; AA=GCF_000247815.1; RF=representative genome; TAX=59894; STAX=59894; NAME=Ficedula albicollis; AL=Chromosome; RT=Major
Sequence
MGSWTKMWPTDWALLMKSWLIFSLGLYIQVSKTLACPKVCRCDRNFVYCNERSLTSVPLG
IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFQEAISLKLLFLSKNHLSSVPVGLPL
DLQELRVDENRIAVISDLAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLSKLKEFSIVRN
SLTYPPPDLPGTHLLRLYLQDNQITHIPLTAFSNLHKLERLDISNNQLRMLAKGVFDNLH
NLRQLTVRNNPWLCDCSIKWVTEWLKFIPASINVRGFMCQGPEQVRGMAVRELNMNMLSC
PTTTPGLPLIITPVPATTVPTTLAPSSSFPPSSSKYNPLTPIIATLPTVPDREDRERVTP
PLSEWIQLSVHFVNDTCIQVNWMSLFSVMAYKLTWVKMGHSLVGGIVHERIISGEKQQSS
LVNLEPKSTYRICLVPLDTYNNYRTGEDTVCSEATTKASFLNGSNIPSSHEQTTSQNLGS
PFLLAGLIGGAVIFVLMVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSI
LEMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSNVSDLEHCH
T
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Identical sequences U3KJD9
ENSFALP00000015143 XP_005047515.1.66865 XP_005047517.1.66865 XP_005047518.1.66865 XP_016154173.1.66865 XP_016154174.1.66865 XP_016154175.1.66865

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