SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_005068731.1.91757 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_005068731.1.91757
Domain Number 1 Region: 60-329
Classification Level Classification E-value
Superfamily L domain-like 1.97e-42
Family Ngr ectodomain-like 0.0065
Further Details:      
 
Domain Number 2 Region: 578-660
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000261
Family Fibronectin type III 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005068731.1.91757
Sequence length 735
Comment PREDICTED: leucine-rich repeat neuronal protein 4 [Mesocricetus auratus]; AA=GCF_000349665.1; RF=representative genome; TAX=10036; STAX=10036; NAME=Mesocricetus auratus; AL=Scaffold; RT=Major
Sequence
MRWMLLLLLPLRQPLLPLLLVQSQSLAGLSQETIPLFRLTHQGPWDNQDSHTVTNSPCEG
LPAAGATTLTLANRSLERLPSCLPHTLRILDGSHNLLRTFGGPEFGRLPELHMLTLNHNR
ISTLHWGHGMPAMLQELDLSHNLLAALPPCAGPPVLNLRSLALEANPLRALQPRTFACFP
ALQLLNLSCSELSHIAQEAFVREDGGPLATLEILDLSSTRLERVESGWIRNLPQLKSLYL
RKMPRLKTLEGDIFKMTPNLQQLDCQESPALTSVHTQIFQDTPHLQVLLLQNCNLSSFGP
WIVNSSQILSVSLFGNPLTCSCELAWLLMDANKTVLHRAADTMCEPTPGSKVPFSGPLSL
FQLSDVCRPDQSSTLLTSNPPHFDHAPQAQGPSIGQSTAPSAQSGGGQQNITKVPSHTVA
SLTHGSWMHNNTSEETARSTTDSVTIYHLSRALPGAASTGPEQTATHILEPSISPASTTL
LGKYFGPSPTSPSPRRISQTNQRTQATTMALHTHPPQDEIPVLLLDDDSKEDETRDQVVS
SHQDVSCDYHPCKHLQTPCAELQRRFKCRCPGLSGEDTIPDPPKLQGVSEMTDTSMLIHW
CAPNSVVHWYQINYLAEGGSGNQSVVGIYATARQHPLYKLSPSTTYHVCVQAANRAGLSQ
QQTSGWKRSCANFTTKPSSVVIFWALCTSSGLLLVSTLVLSVCLWRQRWKPHRQFYDTDL
VAFKNPARAEEVTQW
Download sequence
Identical sequences A0A1U7QBF4
XP_005068731.1.91757

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]