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Domain assignment for XP_005158326.1.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005158326.1.45394
Domain Number 1 Region: 396-823
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.4e-134
Family Reverse transcriptase 0.0000599
Further Details:      
 
Domain Number 2 Region: 997-1151
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.52e-36
Family Retroviral integrase, catalytic domain 0.005
Further Details:      
 
Domain Number 3 Region: 270-368
Classification Level Classification E-value
Superfamily Acid proteases 0.000000000826
Family Retroviral protease (retropepsin) 0.016
Further Details:      
 
Domain Number 4 Region: 193-234
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000733
Family Retrovirus zinc finger-like domains 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005158326.1.45394
Sequence length 1300
Comment uncharacterized protein K02A2.6 [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MMALIGSIGEFAPKAESWSAYIERLEQFFVANEISQEKQVATLLSVMGATTYGLLRNLVQ
PEKPKDKSYKEIVDTLKSHFEPKPLLIAERFRFNHCNQRADETVTEYAAELKQCAVSCEF
GATLDEALRDRFVSGIRNEACQRRLLSESNLTFARAFEIALSMETAEKDTQQLRGHDSHS
SVIHKVEVRPFSQREKKCYRCHGKNHSAQVCHFKDARCHNCGKIGHIKRACRGKMEVGKR
KLYAEKNTKYVEAEEAELPMFSLRAEENSKKSFTETFDVNGKEIMMEIDTGAAVSIISEK
EFKAVFPTEPLEVARVKLKTYTGELLPVLGQFEAKVSYDGQTEVLSLIVVKGEGPSLCGR
NWLQKLSLNWRKIKHVSQVQQVTSIEEVLESCSEVFKEELGTLRGLKAKIRVNPEISPRF
CKARPLPFSMKAQVDAELDRLEKAGIITPVKYSEWAAPIVPVVKKDKTLRLCGDYKLTVN
QAVTTEIYPLPRIEELMATLSGGTIFSKIDLASAYQQVLLEDESKELLTINTHRGLFVYN
RLPFGVSSAPSIFQRIMENLMRDLDVIVYLDDLLVTGKTEQEHLQRLQAVLKRLQENGLR
VKKSKCEFGKSQIEYLGFVLNSQGLHPSPDKVDAVKNAPVPTCVKELKAFLGLVNYYGRF
LPNQSTMAAPLYRLLRDNVPWEWKQSEQEAFEKCKDLLTNEKVLIHYDPGLPLTLACDSS
AYGIGAVLQHTMPTGEERPIAYASRTLSPAEKKYSQIEKEGLSLIFGIKKFHQYLWGRKF
KMVTDHKPLLTLFGEHKSLPTMAAARIQRWAIILSAYDYHIEYCPSEKNSNADGLSRVPL
PVMTDGGTAALSEHIHALIAEHFEQAPLKAEHVSRVTRRDKVLSKVLKYVMEGWPMNVDE
NLKAYHLRRLELSAERGCVLWGTRVIIPEKLRKIVLKELHVGHQGMVKMKALARKYVWWP
KMDAELEQVCRTCEPCQMEQKAPRQVPLHPWEFPGQSWKRLHIDFAGPFLGHTFMIIVDA
YSKWLEVFRMPNLTSQSTISRLRRLFAAYGLPEHIVTDNGTQFTSEEFKNFMQQNGILHS
TSAPGHPATNGLAERYVQTFKGGIKKLAHVTMDLEDKISLFLMQYRTTPNCTTGQSPADL
FLNRHVRTRLDFVHPDVTVAVRRKQYLQKFHHDKRSVERSFSEKDAVYLRNTTGKGNKWV
PGVIVKQTGPVSYNVQGQDTDGTFRRHCDQLKPQVVVDDPVEQMDCSETGTETSVRPCAS
EEEEPVISETSEKDSVGNTSMAQGLRRSSRIRKTPKRYDP
Download sequence
Identical sequences XP_005158326.1.45394

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