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Domain assignment for XP_005158549.1.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005158549.1.45394
Domain Number 1 Region: 187-259
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 1.02e-17
Family PHD domain 0.01
Further Details:      
 
Weak hits

Sequence:  XP_005158549.1.45394
Domain Number - Region: 299-335
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0096
Family PHD domain 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005158549.1.45394
Sequence length 829
Comment protein Jade-1 isoform X1 [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MKRSRVPSTSEDSDNGSNSTSWSQHSNSKHRKQSGKRPSEVFRTDLITAMKLHDSHQLNP
EDYYELADPWRQEWEKGVQVPVSPESIPQCTVRTVAEKSTAPLFIKPKKLIRSSESSMLG
YVGIQTLADGMCRYDLNEEDVAWLQITNEEFSKMGMQPLDELTMERVMEEFERRCYDNMS
HAMETEEGLGIEYDEDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACYGILKVPEGSWLC
RTCALGIFPKCHLCPKKGGAMKPTRSGTKWVHVSCALWIPEVSIGNPEKMEPITNVSHIP
SNRWALICCLCKEKTGACIQCSAKSCRVAFHVTCGLHCGLKMNTILTEADEVKFKSFCPK
HSGLDWNEEEGDDDRPVKVPTREDRSRNRGIDFSASSQTRLSQNPEETRLSERKLRVQQL
EDEFYRFVAADEVAEHLQLPLEMVDFLFQYWKLKRKVNFNQPLIMPKKEEEDSLARREQE
VLLRRLRLFTHLRQDLERVRNLTYMVSRRERIKRTLCRVQEQIFHHHVRLLEQGRVTGIS
STRRLEEAMFYFRTTPPVPASPQPLKGHCGQNSTLSSSEKGSNSYRSSKHIEADKPAKML
MDGVPSSGDSVRSETVMSASSRRSEGRTRSGESHRKEEESERPLEDRRRKSKLWDQVSIK
DKLRHAKSMEDTLSSETELDTMDDRLLLSHTNANSVATAPNMYSGSPRKTNASHQGKLVP
NGTSGRHLKNWGSFRIPKRSERTSAGRQTERQEADNTADQNSSLKTFSTSPSSPQIRTRL
RTGSENRRHLEESDLGQSEQGKRCHTQRLPSPMTRRYGSDVIQRGVLAS
Download sequence
Identical sequences F1QA19
ENSDARP00000042059 ENSDARP00000042059 ENSDARP00000110796 XP_005158548.1.45394 XP_005158549.1.45394 XP_017207087.1.45394 7955.ENSDARP00000042059

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