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Domain assignment for XP_005227167.1.76553 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005227167.1.76553
Domain Number 1 Region: 20-283
Classification Level Classification E-value
Superfamily L domain-like 7.29e-49
Family Ngr ectodomain-like 0.012
Further Details:      
 
Domain Number 2 Region: 279-372
Classification Level Classification E-value
Superfamily Immunoglobulin 9.18e-20
Family I set domains 0.01
Further Details:      
 
Domain Number 3 Region: 405-480
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000984
Family Fibronectin type III 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005227167.1.76553
Sequence length 636
Comment PREDICTED: leucine-rich repeat and fibronectin type-III domain-containing protein 4 isoform X1 [Bos taurus]; AA=GCF_000003055.6; RF=representative genome; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Minor
Sequence
MAPPLLLLLLASGAAACPLPCICQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFI
QALGPPDFRNMTGLVDLTLSRNAITRIGARAFGDLESLRSLHLDGNRLAELGAGSLRGPA
NLQHLILSGNQLGRIAPGAFDDFLGSLEDLDLSYNNLRQVPWAGIGAMPALHTLNLDHNL
IDALPPGAFAQLSQLSRLDLTSNRLATLAPDPLFSRGRHAEASPAPLVLSFSGNPLHCNC
ELLWLRRLARPDDLETCASPPGLAGRYFWTVPEGEFSCEPPLIARHTQRLWVLEGQRATL
RCRALGDPVPTMHWVGPDDRLVGNSSRARAFPNGTLEIGVTGSGDAGAYTCIATNPAGEA
TARVELRVLALPHGGNGSTEGGRPGPSDIAASARTAAEGEGTPESEPAVQVTEVTATSGL
VSWGPGRPADPVWMFQLQYNSSEDETLIYRIVPASSHHFLLKHLVPGADYDLCLLALSPA
AGPSDLTATRLLGCAHFSTLPATPLCHALQAHVLGGTLTVAVGGVLVAALLVFTVALLVR
GRGAGNGRLPLKLSHVQSQTNGGPSPTPKAHPPRSPPPRPQRSCSLDLGDSGGCYGYARR
LGGAWARRSHSVHGGLLGAGGRGAGGSAERLEESVV
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Identical sequences F1MJL8
ENSBTAP00000049410 ENSBTAP00000049410 NP_001193183.1.59421 NP_001193183.1.76553 XP_005227167.1.76553

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