SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for XP_005238646.1.75256 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005238646.1.75256
Domain Number 1 Region: 53-338
Classification Level Classification E-value
Superfamily L domain-like 1.25e-38
Family Ngr ectodomain-like 0.015
Further Details:      
 
Domain Number 2 Region: 625-709
Classification Level Classification E-value
Superfamily Fibronectin type III 4.82e-17
Family Fibronectin type III 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005238646.1.75256
Sequence length 787
Comment PREDICTED: leucine-rich repeat neuronal protein 4 [Falco peregrinus]; AA=GCF_000337955.1; RF=representative genome; TAX=8954; STAX=8954; NAME=Falco peregrinus; AL=Scaffold; RT=Major
Sequence
MFSPLLVLSLLVGNTASSRLSRAEPAASRDVTTFFQLAQEDSWENVNLTSMSCEDRKNAT
WITLQLTNSSLTAFPICLPEALETLDLSNNLLEEVNSTEIANLPHLHTLSLRQNPLRSVR
WGSEVLSSLLSLDLSFNKLSSVPSCHSSALPNLRWLSLAGNPLIEIQPLAFSCYPQLQFL
NLSATLLGQNDSRGIRESAFAISTSPSEAMNTTGNTIIVLDLSGTFLEKIEPEWTRDLPN
LRSLHLTKMSRLRSLNTDFFKSMPGLQELNCQDSPSLGFVRTEMFDSAPHLSHLSFENCN
LSSFNPWNISSSNSSIIINLYGNPLLCDCQLSWLLSIPNKVVLQKAWKTFCNTSQEDWGR
PSTSFSLLELYNKCQSERNVTLHDSKTPSPKHDAFSLTGYDTTTVATTVDSAPLTKDTYT
SSLIQKNVTSTTAANPTEPMLTKANSSSHEEVAAAEFTSHLPSSTSITTSLGFLRELYSQ
PSNYGYTSQTETDQLKRELRTTDATFPQKGPFNQPTSDYSTRATGNPNATDHYMHSFATR
AGEGTPRMNLPQLNSTRTDAQSEPASTRSLIHYVDDYDYDEQSTKTPVQAYTSCDYNPCR
HLQKPCSELQNASPCLCPGMSREDEVPDPPRLREVSEVTDSSAQIRWCAPNSVVHTYKLT
LHAQGNEDRQFVLDNIYSTARQYTLYNLLPYTTYHICVTASNKAGSSQPESQGIPGNSCT
KFKTKPSYKCVFAALSAASGLFLISTIILSVCLCKACKKPQSEQYGTHLVSYKNPAFDYP
LKLQTTN
Download sequence
Identical sequences XP_005238646.1.75256 XP_005445666.1.10750

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