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Domain assignment for XP_005328429.1.77405 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005328429.1.77405
Domain Number 1 Region: 299-413
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.79e-33
Family Spermadhesin, CUB domain 0.00053
Further Details:      
 
Domain Number 2 Region: 143-252
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.36e-32
Family Spermadhesin, CUB domain 0.00046
Further Details:      
 
Domain Number 3 Region: 464-576
Classification Level Classification E-value
Superfamily Frizzled cysteine-rich domain 1.44e-27
Family Frizzled cysteine-rich domain 0.00031
Further Details:      
 
Domain Number 4 Region: 258-302
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000128
Family LDL receptor-like module 0.002
Further Details:      
 
Domain Number 5 Region: 419-458
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000314
Family LDL receptor-like module 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005328429.1.77405
Sequence length 579
Comment membrane frizzled-related protein isoform X2 [Ictidomys tridecemlineatus]; AA=GCF_000236235.1; RF=representative genome; TAX=43179; STAX=43179; NAME=Ictidomys tridecemlineatus; AL=Scaffold; RT=Major
Sequence
MKEYSDVILCMEATELSKTEFCNPAFEPEAGLPGPSAALRQDASHNIQAPWHGRRPRGLQ
PDCHFSWLCILLLASLLLLLLGLLAAIILSQLPAAPPPGATKSPLPAQGLTTTTTPTTST
STTSSATSGQQGADASPAHQATCGGLLPGPRGFFSSPNYPDPYPPNAHCVWHIQVATDHT
IQLKIEALSVEGVAACLFDRLEISPEPEGPLLRVCGKVPPPTLNTNASRLQVAFVSDSSV
EGSGFQAWYQAVAPGHGSCAHEEFHCDQLVCLLPDSVCDGFANCADGSDETNCSAKLLGC
GGNLTGLQGTFSTPSDLQQHPHQQLCTWHISVPVGHGIELQFWNFSLEAQDECKFDYVEV
YETSSSGALSLLGRFCGAETPPHLVSSHHELAVLFRTDHSISSGGFSATFKAFNATENPC
GPRKFLCQNGGCRDLQWMCDLWRDCIDGNNDKNCSSPLLPPPELACEPVQVEMCIGLSYN
TTAFPNIWVGMATQEEVVDVLRGYKSLTSLPCYQNFRRLLCGLLVPRCTLLGSVLPPCRS
VCQEAERQCQSGLALLGTPWPFNCNRLPEAAGLEACAQP
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Identical sequences I3M604
XP_005328429.1.77405 ENSSTOP00000004836 ENSSTOP00000004836

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