SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_005338179.1.77405 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_005338179.1.77405
Domain Number 1 Region: 213-461
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 4.45e-58
Family Voltage-gated potassium channels 0.00046
Further Details:      
 
Domain Number 2 Region: 86-183
Classification Level Classification E-value
Superfamily POZ domain 7.59e-25
Family Tetramerization domain of potassium channels 0.00000744
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005338179.1.77405
Sequence length 511
Comment potassium voltage-gated channel subfamily A member 10 [Ictidomys tridecemlineatus]; AA=GCF_000236235.1; RF=representative genome; TAX=43179; STAX=43179; NAME=Ictidomys tridecemlineatus; AL=Scaffold; RT=Major
Sequence
MDVCGWKEMEVALVNFDNSDEIQEEPGYATDFDPSNPKGRPGSSPFSNWKILISDSTNLE
TTFSKLPGDYADPPGPEPLVWNEGNQRVIINIAGLRFETQLRTLNQFPETLLGDREKRMQ
FFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDIFADEISFYELGSEAMDQFR
EDEGFIKDPETRLPTNEFHRQFWLLFEYPESSSAARGVAVVSVLVVVISITIFCLETLPE
FREDRELKVVRDPRLHANKTDLSQTMFSDPFFMVESTCIMWFTFELVLRFVVCPSKTDFF
RNLMNIIDIISIIPYFATLITELVQETEPSNQQNMSLAILRIIRLVRVFRVFKLSRHSKG
LQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPDGFWWAVVTMT
TVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQNIPGEI
DKILNSVGSRTGSTDSLNKTNRGCASEKSRK
Download sequence
Identical sequences I3MXX1
XP_005338179.1.77405 ENSSTOP00000016966 ENSSTOP00000016966

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]