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Domain assignment for XP_005455534.1.78416 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005455534.1.78416
Domain Number 1 Region: 320-490,526-661,721-827
Classification Level Classification E-value
Superfamily Cysteine proteinases 2.75e-82
Family Ubiquitin carboxyl-terminal hydrolase, UCH 0.0009
Further Details:      
 
Domain Number 2 Region: 174-282
Classification Level Classification E-value
Superfamily RING/U-box 2.24e-36
Family Zf-UBP 0.00000349
Further Details:      
 
Domain Number 3 Region: 685-739
Classification Level Classification E-value
Superfamily UBA-like 0.00000000000000488
Family UBA domain 0.007
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005455534.1.78416
Sequence length 829
Comment PREDICTED: ubiquitin carboxyl-terminal hydrolase 5 isoform X2 [Oreochromis niloticus]; AA=GCF_001858045.1; RF=representative genome; TAX=8128; STAX=8128; NAME=Oreochromis niloticus; AL=Chromosome; RT=Major
Sequence
MADVGELLMSVLSTIRVPKPGDRVHKDECALSFSSPESEGGLYVCMNSFLGLGSQYVDRH
HARSGQRAYLHITRTRKAKKEDDGNSGSGHPPKKKPTRLAIGIEGGFDVEQEQYEEDVKV
VILPDRQEVTSEDLTTMPDVVRERVSLSMAGIMAADSVSHTLQVQQWDGEVRQESKHAAD
LKQLDNGVKIPPSGWRCEVCDLQENIWMNLTDGKVLCGRRYFDGSGGNNHALLHYQETGY
PLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLAHFGIDMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLRPLFGPGLTGMKNLGNSCYLNSVMQVLFTIPDFQSKYVSNIDKII
DEAPSDPTQDFKTQVAKLGYGLLSGDYSKPAPDPGEENGAAEPRGDQIGIAPQMFKALVG
RGHPEFSTNRQQDAQEFLLHFINMVERNCRSGSNPSEAFRFLVEERIVCQQSQKAKYTQR
VDYIVQLPVPMDQATNTEELQEAERRREEGDSSAPTVRAQIPFTACMAALSEPEILTDFW
SSAVQGKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSGLRATG
QQPGEELLPEVAPPPLMTPDVEVKAPVLDDSTVSQLCEMGFPLEACRKAVYYTGNTGIDA
AMNWIMSHMDDPDFSAPLVLPGCSSGPGTTPTESLSEEHLATIVSMGFSRDQATKALRAT
SNVLDRAVDWIFSHLDDLESMDVSEGGRSAAESEGGRDPPPGPRVRDGPGKYELFAFISH
MGTSTMCGHYVAHIKKDQQWVIFNDQKVCASEKPPKDLGYLYFYRRVAE
Download sequence
Identical sequences I3K5G9
ENSONIP00000016364 XP_005455534.1.78416 ENSONIP00000016364

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