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Domain assignment for XP_005540905.1.63531 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005540905.1.63531
Domain Number 1 Region: 1247-1287,1318-1451
Classification Level Classification E-value
Superfamily Fibronectin type III 1.95e-33
Family Fibronectin type III 0.0027
Further Details:      
 
Domain Number 2 Region: 1053-1242
Classification Level Classification E-value
Superfamily Fibronectin type III 1.61e-31
Family Fibronectin type III 0.0024
Further Details:      
 
Domain Number 3 Region: 123-291
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.24e-18
Family Pentraxin (pentaxin) 0.087
Further Details:      
 
Domain Number 4 Region: 1424-1507
Classification Level Classification E-value
Superfamily Fibronectin type III 5.91e-16
Family Fibronectin type III 0.0048
Further Details:      
 
Domain Number 5 Region: 640-690
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000024
Family Laminin-type module 0.0066
Further Details:      
 
Domain Number 6 Region: 846-896
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000307
Family Laminin-type module 0.013
Further Details:      
 
Domain Number 7 Region: 794-843
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000268
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 8 Region: 899-941
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000502
Family Laminin-type module 0.0059
Further Details:      
 
Domain Number 9 Region: 693-743
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000698
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 10 Region: 746-788
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000809
Family Laminin-type module 0.0057
Further Details:      
 
Domain Number 11 Region: 574-626
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000363
Family Laminin-type module 0.027
Further Details:      
 
Domain Number 12 Region: 1001-1049
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000893
Family Laminin-type module 0.014
Further Details:      
 
Domain Number 13 Region: 950-994
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000109
Family Laminin-type module 0.0097
Further Details:      
 
Domain Number 14 Region: 517-571
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000628
Family Laminin-type module 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005540905.1.63531
Sequence length 1545
Comment PREDICTED: usherin isoform X2 [Macaca fascicularis]; AA=GCF_000364345.1; RF=representative genome; TAX=9541; STAX=9541; NAME=Macaca fascicularis; AL=Chromosome; RT=Major
Sequence
MNCPVLSLGSGFLFQVIDMLIFAYFASISLADSRGLFPRLENVGAFKNVSIVPTQAVCGL
PDRSTFCHSSAAAESIQFCSQRFCIQDCPYRSSHPTYTALFSAGLSCITPDKNDLHPNSH
SNSTSFVFGNHKNCFSSPPSPRLMASFTLAVWLKPEQQGVMCVIEKTVDGQIVFKLTISE
KETMFYYRTVNGLQPPIKVMTLERILVKKWIHLSVQVHQTKISFFINGVEKDHTPFDART
LSGSITDFASGTVQIGQSLNGLEQFVGRMQDFRLYQVALTNREILEVFSGDLLRLHAQSH
CRCPGSHPRVHPLAQRYCVPNDAGDTADNRVSRLNPEAHPLSFVNDNDVGTSWVSNVFTN
VTQLNQGVTISVDLENGQYQVFYIIIQFFSPQPTEIRIQRKKENSLDWEDWQYFARNCGA
FGMKNNGDLEKPDSVNCLQLSNFTPYSRGNVTFSILTPGPNYRPGYNDFYNTPSLQEFVK
ATQIRFHFHGQYYTTETAVNFRHRYYAVDEITISGRCQCHGHADNCDTTSQPYRCLCSQE
SFTEGLHCDRCLPLYNDKPFRQGDQVHAFNCKRCQCNSHSKSCYYNVSVDPFPFEHFRGG
GGVCNDCEHNTTGRNCELCKDYFFRQVGADPSAIDVCKPCDCDKVGARNGSILCDQIGGQ
CNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKCKANV
IGLRCDRCNFGFKFLRSFNDDGCEPCQCNLHGSVNKFCNPLSGQCECKKEAKGLQCDTCR
ENFYGLDVTNCKACDCDTAGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGHFYLRQNNS
FLCLPCNCDKAGTINGSLLCDKSTGQCPCKLGVTGLRCNQCEPHRYNLTIDNFQGCQMCE
CDSLGTLPGTICDPISGQCLCVPNRQGRRCNQCQPGFYISPGSANGCLPCSCHTAGSVHH
ICNSLTGQCVCQDASIAGQRCDQCKDRYFGFDPQTGRCQPCNCHLSGALNETCHLVTGQC
FCKQFVTGSKCDACVPSASHLDVNNLLGCSKTPFQQPPPRGQVQSSSAINLSWSPPDSPN
AHWLTYSLLRNGFEIYTTEDQYPYSVQYFLDTDLLPYTKYSYYIETTNVHGSTRSVTVTF
RTKPGVPEGNLTLSYIIPVGSDSVTLTWTTLSNQSGPIEKYILSCVPLAGGQPCVSYEGH
ETSATIWNLVPFAKYYFSVQACTSGGCLHSLPITVTTAQAPPQRLSPPKVQKISSTELHV
EWSPPMELNGIIIRYELYMRRLRSTKETTSEESRVFQSSGWLSPQSFAESANENALKPPQ
TMTTITGLEPYTKYEFRVLAVNMAGSVSSAWVSERTGESAPVFMIPPSVVPLSSYSLNIS
WEKPADNVTRGKVVGYDINMISEQSLQQSIPVVFSQLLYTAKSQELSYTVEGLKPYRIYE
FTVTVCNSVGCVTSASGAGQTLAAAPAQLRPPLVKGINSTTIHLRWFPPEELNGPSPIYQ
LERRESSLPALMTTMMKGIRFTGNGYCKFPSSTHPVNTDFTGKCV
Download sequence
Identical sequences A0A2K5VJD4
XP_005540905.1.63531

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