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Domain assignment for XP_005600633.1.31192 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005600633.1.31192
Domain Number 1 Region: 2159-2252
Classification Level Classification E-value
Superfamily C-type lectin-like 1.74e-31
Family Link domain 0.00013
Further Details:      
 
Domain Number 2 Region: 509-647
Classification Level Classification E-value
Superfamily FAS1 domain 2.75e-29
Family FAS1 domain 0.0019
Further Details:      
 
Domain Number 3 Region: 1473-1521,1599-1713
Classification Level Classification E-value
Superfamily FAS1 domain 4.32e-28
Family FAS1 domain 0.0024
Further Details:      
 
Domain Number 4 Region: 965-1122
Classification Level Classification E-value
Superfamily FAS1 domain 1.23e-23
Family FAS1 domain 0.0037
Further Details:      
 
Domain Number 5 Region: 1714-1831
Classification Level Classification E-value
Superfamily FAS1 domain 3.66e-19
Family FAS1 domain 0.013
Further Details:      
 
Domain Number 6 Region: 385-501
Classification Level Classification E-value
Superfamily FAS1 domain 4.05e-19
Family FAS1 domain 0.0051
Further Details:      
 
Domain Number 7 Region: 2250-2413
Classification Level Classification E-value
Superfamily FAS1 domain 1.57e-17
Family FAS1 domain 0.0097
Further Details:      
 
Domain Number 8 Region: 1130-1255
Classification Level Classification E-value
Superfamily FAS1 domain 0.000000000667
Family FAS1 domain 0.009
Further Details:      
 
Domain Number 9 Region: 1545-1582
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000407
Family Merozoite surface protein 1 (MSP-1) 0.088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005600633.1.31192
Sequence length 2522
Comment PREDICTED: stabilin-1 isoform X2 [Equus caballus]; AA=GCF_000002305.2; RF=representative genome; TAX=9796; STAX=9796; NAME=Equus caballus; breed=thoroughbred; AL=Chromosome; RT=Major
Sequence
MAGPRGLLLSLLAFCLAGSGFVMGQKVLSRRCDVKTKFVTHMPCTLCPIIKKQTCPPGWL
REFPGKISQDCRYEVQLGDSLVSMSGCSLECWKDVVQKACCPGYWGSQCYECPGGAKTPC
NGHGTCLDGIDRNGTCVCQENFSGSACQDCQDPNRFGPDCQSVCSCVHGVCRHGPLGDGS
CLCFAGYTGPRCDQELPVCQALHCPQNAQCSAEAPTCSCLPGHTQQGSECRAPDPCRPSP
CSPLAQCSVSPRGQAECRCPENYHGDGMVCLPQDPCTANHGGCPSNSTLCLYQRPGKASC
SCKPGLVSINHNASTGCFAYCLPNSCDRSATCQVTPDGKTSCVCKEGEVGDGRACYGHLL
HEVQKASQTSTAFLRLRIALAMLDQGCREVLTTSGPFTVLVPSISSIFPRTMNASIAQQL
CKQHIIAGQHILEELGTQHTHKWWTLAGQEITVTFNRFMRKYTYKYKDQPQQTFTIHKAN
YPAVNGIFHVVTALRWQPPTELPEDPKRTISQILASTEAFSRFETILENCGLPSILDGPG
PFTVFAPSNEAVDRLRDGRLIYLFTAGLSKLQELVRYHIYSHGQLTVEKLISKGRVLTMA
NQVLAVNISEEGRILLGPEGVPLRRVDVLAANGVIHMLEGILLPPTILPILPKHCNEEQH
KIVAGSCVDCQALNTSTCPPNSVMLDIFPEECVYTYDPSGLNVLKKGCARYCNQTILKPG
CCKGFFGPDCAQCPGGFSNPCYGKGNCSDGVRGNGACLCFPDYKGIACHICSNPNKHGDQ
CQEDCGCVHGLCDNRPGSGGVCQSGTCAPGFSGRFCNESTGSCGPTEQAQHCHLHARCVT
QGRVARCLCLDGFEGDGFSCTPSNPCSHPDRGGCSENAECVPGTMGTHHCTCHKGWSGDG
RVCVAIDECELDARGGCHADALCSYVGPGQSRCTCKLGFAGDGYMCSPIDPCRAGNGGCH
DLATCRAVGGGQRVCTCPPGYGGDGLSCYGDIFQELEANAHFSVFYQWIKSAGITLPADS
RVTALVPSESAIRRLSPEDQAFWLQPRMLPQLVRAHFLQGSLSEEELARLGGQDVATLSP
TTRWEIHNISGRVWVQNASVDVADLLATNGVLHVLSQVLLPPKGAMPVGQGLLQRLDSVP
AFRLFRELLQHHGLVPQIEAATAYTIFVPTNHSLEVQGNRSSLDVDTVRHHVVLGEALSV
EALQRGGHRNSLLGPAHWLVFYNHSGQPEVNHVPLEGPLLEAPGGSLFGLSGVLTVGSSR
CLHTHAEALREKCINCTRKFRCTQGFKLEDTPKKSCVYQSGYSFSQGCSYTCAKKIQVPD
CCPGFFGTLCEPCPGGLGGVCSGHGQCQDRLLGSGECRCQEGFHGTACEMCELGRYGPNC
TGVCDCAHGLCQEGLRGDGRCVCSVGWQGLRCDQKITGLQCPKKCDPNANCVQDSATAPA
CICAAGYSGNGIYCSEVDPCAHDHGGCSPHANCTKVAPGQRTCTCQDGYTGDGELCQEVN
SCLVHHGGCHLHAECIPTGPQQVSCSCREGYSGDGIRTCELLDPCSQNNGGCSPYAVCKS
IGDGQRTCTCDAAHTVGDGFSCRARVGLELLRDRHASFFSLHLLEYKELKGNGPFTIFVP
HADLMTNLSQDELARIRTQRQLVFRYHVVGCRQLRSQELLEEGYVTTLSGHPLRFSEREG
SIYINDYARVVSSDQQAVNGILHFIDRVLLPPDALHWEPDAAPIPRRNVTAAAESFGYKI
FSSLVTVAGLLPLLQDGSHRPLTMLWPTDSALRALPRDQQAWLYHEDHRDKLAAILRGHV
IRNVEALASDLPNLGPLRTMHGTPISFSCSRARPKICSICGLEPPCPQGSQEQGSPEACW
RYYSKFWMSPPLYSLALRGIWPQPSLWGPPQGLGRGCHRNCVTTTWKPSCCPGHYGSECR
ACPGGASSPCSDHGVCMDGMSGSGQCRCRSGFAGTACELCAPGAFGPHCQACRCTSHGHC
DEGLGGSGSCFCDEGWTGSRCEVQLELQPVCAPPCAPEAVCRVGNSCECSLGYEGDGRTC
TVADLCQDGHGGCSEHANCSQVGTVVTCTCLPDYEGDGWSCRARDPCADGHRGGCSEHAD
CLNTGPNTRRCVCHAGYVGDGLQCLEEPEPPVDRCLGQPPPCHVDAVCTDLHFQEKRAGV
FHLQATSGPYGLNFSEAEAACGAQGAVLASLPQLSAAQQLGFHLCLVGWLANGSAAHPVV
FPAADCGDGQVGVVSLGTRGNLSERWDAYCYREQDVACQCRDGFVGDGTSVCNGKLLDVL
ATTANFSTFYGMLLGYANATPRGLDFLDFLDDELTYKTLFVPVNEGFVDNMTLSGPDLEL
HASNTTFLSTNASQGTMLPAHSGLSLVISDVGPDNSTWVPVAPGAVVVSRVIVWDIMAFN
GIIHALASPLLAPPQPHAVVAPEAPSVAVGAGAVVATGALLGLVAGALYLRARGKATGFG
FSAFQAEDDADDDFSPWQEGTSPTLVSVPNPVFGSHDAFCEPFDDSLLEEDFPDTQRILA
VK
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Identical sequences XP_005600633.1.31192

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