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Domain assignment for XP_005614311.1.31192 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005614311.1.31192
Domain Number 1 Region: 73-205
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 8.79e-34
Family Canonical RBD 0.0000222
Further Details:      
 
Weak hits

Sequence:  XP_005614311.1.31192
Domain Number - Region: 15-58
Classification Level Classification E-value
Superfamily beta-sandwich domain of Sec23/24 0.0549
Family beta-sandwich domain of Sec23/24 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005614311.1.31192
Sequence length 470
Comment PREDICTED: non-POU domain-containing octamer-binding protein [Equus caballus]; AA=GCF_000002305.2; RF=representative genome; TAX=9796; STAX=9796; NAME=Equus caballus; breed=thoroughbred; AL=Chromosome; RT=Major
Sequence
MQSNKTFNLEKQNHTPRKHHQHHHQQHHQQQQQQPPPPPIPANGQQASSQNEGLTIDLKN
FRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTL
AEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIV
DDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEKLV
IKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEAREKLEMEME
AARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRREEEMRRQQEE
MMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPPAPVPAGTPAPPGPATMMP
DGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEFAPNKRRRY
Download sequence
Identical sequences A0A2K6ELV8 F1PTP3 F6UBF6 G1MC92 I3MQH7 K9IVQ3 M3Y0P7
ENSCAFP00000025137 ENSCAFP00000025137 ENSVPAP00000002101 ENSVPAP00000002101 XP_001492850.1.31192 XP_001492878.1.31192 XP_004000663.1.62641 XP_004439906.1.5094 XP_004439907.1.5094 XP_004777287.1.14098 XP_005340005.1.77405 XP_005614311.1.31192 XP_005641524.1.84170 XP_006217709.1.17985 XP_007122148.1.24612 XP_007122149.1.24612 XP_007470158.1.90284 XP_008565774.1.73410 XP_008710472.1.72690 XP_008710473.1.72690 XP_010971903.1.22495 XP_010977060.1.51371 XP_011235349.1.58354 XP_012390630.1.21590 XP_012390631.1.21590 XP_012390632.1.21590 XP_012498740.1.63892 XP_012498745.1.63892 XP_012903680.1.14098 XP_014419053.1.101512 XP_014584443.1.31192 XP_014693183.1.49734 XP_014693184.1.49734 XP_019284227.1.44245 XP_019284228.1.44245 XP_019284229.1.44245 XP_019284230.1.44245 XP_019679508.1.62641 XP_019804609.1.83887 XP_019804610.1.83887 XP_019804611.1.83887 XP_021536265.1.83697 XP_021536286.1.83697 XP_021536293.1.83697 XP_021536303.1.83697 XP_021536311.1.83697 ENSMPUP00000004898 ENSAMEP00000016970 ENSTTRP00000009104 ENSTTRP00000009104 9796.ENSECAP00000006689 ENSECAP00000006689 ENSAMEP00000016970 ENSECAP00000006689 ENSMPUP00000004898

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