SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_005632513.1.84170 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_005632513.1.84170
Domain Number 1 Region: 2210-2303
Classification Level Classification E-value
Superfamily C-type lectin-like 1.88e-32
Family Link domain 0.0001
Further Details:      
 
Domain Number 2 Region: 510-648
Classification Level Classification E-value
Superfamily FAS1 domain 8.63e-30
Family FAS1 domain 0.0017
Further Details:      
 
Domain Number 3 Region: 1474-1522,1600-1714
Classification Level Classification E-value
Superfamily FAS1 domain 1.2e-28
Family FAS1 domain 0.0023
Further Details:      
 
Domain Number 4 Region: 1714-1869
Classification Level Classification E-value
Superfamily FAS1 domain 1.57e-26
Family FAS1 domain 0.0038
Further Details:      
 
Domain Number 5 Region: 966-1123
Classification Level Classification E-value
Superfamily FAS1 domain 1.83e-23
Family FAS1 domain 0.0039
Further Details:      
 
Domain Number 6 Region: 386-502
Classification Level Classification E-value
Superfamily FAS1 domain 2.75e-19
Family FAS1 domain 0.0071
Further Details:      
 
Domain Number 7 Region: 2301-2463
Classification Level Classification E-value
Superfamily FAS1 domain 2.22e-16
Family FAS1 domain 0.011
Further Details:      
 
Domain Number 8 Region: 1132-1255
Classification Level Classification E-value
Superfamily FAS1 domain 0.000000017
Family FAS1 domain 0.0072
Further Details:      
 
Domain Number 9 Region: 1545-1583
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000023
Family Merozoite surface protein 1 (MSP-1) 0.061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005632513.1.84170
Sequence length 2573
Comment PREDICTED: stabilin-1 isoform X1 [Canis lupus familiaris]; AA=GCF_000002285.3; RF=representative genome; TAX=9615; STAX=9612; NAME=Canis lupus familiaris; breed=boxer; AL=Chromosome; RT=Major
Sequence
MAGPRGLLLLCLLAFCLAGSHFTRGQKVRSRRCDVKTKFVTHLPCTVCPAIKRRMCPAGW
LRELPEKILRDCSYEVQLGDSLMSMRGCSLECWKDVVEKACCPGYWGSQCYECPGGAETP
CNGHGTCLDGIDGNGTCVCQQNFSGSACQECQDPKWFGPNCQSVCSCVHGVCSHGPLGDG
SCLCFAGYTGPRCDQELPVCQALNCPQNSQCSAEAPACSCLPGHTQQGRECQAPNPCRPS
PCSPLAQCSVSPTGQAQCRCPKNYYGDGMVCLPQDPCTINYGGCPRNSTLCLYQRPGKAS
CLCKPGLVSINHNASAGCFAYCFPDSCDRSATCQLTPDGKTSCVCKEGEVGDGRACYGHL
LHEIQKAGQLGLVLLRLKVSLAMLDQGCREILSTSGPFTVLVPWLSSTSSRTMNVSFARQ
LCKQHIIAGQHVLEEPGSQQTRRWWTLAGQEITVTYNRFMQKYTYKYKEHPKQTFTIHKA
NYPAANGVFHLVTALQWQPPPELPEDPKRTIGQILASTEAFSRFETILENCGLPSILDGP
GPFTVFAPSNEAVDKLRDGRLIYLFTAGLSKLQELVKYHIYSHGQLTIEKLISKGRVLTM
ANQVLAVNISEEGRILLGPDGAPLRRVDVLAANGVIHMLEGILLPPTILPILPKHCSEEK
HEMVAGSCVDCQALNTSTCPPNSIKLDIFPKECVYTHDPTGLNVLKKGCASYCNQTILKP
GCCKGFFGPDCAQCPGGFSNPCYGKGNCSDGVQGNGACLCFPDYKGIACHICSNPNKHGD
RCQEDCGCVHGLCDNRPGSGGVCQHGTCAPGFSGRFCNESTGNCGPSEQAQNCHPHARCV
RQGGVARCVCLDGFEGDGFSCTPSNPCSRPGRGGCSENAECVPGAPGTHHCTCNKGWSGD
GRVCVAIDECELDARGGCHADALCSYVGPGQSRCTCKLGFAGDGYVCSPIDPCRAGNGGC
HDLATCRPVGGGQRVCTCPSGYGGDGFSCYGDIFRELEANAHFSVFYQWIKSAGLTLPTG
SRVTALVPSESAIRRLSPEDQAFWLQPRALPQLVRAHFLQGAFSEEELAQLGGQDVATLS
PTTRWEIHNISGRVWVQNASVDVADLLATNGVLHVLSQVLLPPRGSVPQGQGLLQQLDLV
PAFRLFRELLQHHKLVSQIEAATAYTIFVPTNRSLEAQGNSSSLDADTVRHHVILGEALS
HEALQKGGHRNSLLGPAHWLVFYNHSGQPEVNHVLLEGPMLEAPGRSLFGLSGVLTVGSS
RCLHSHAESLREKCVNCSRRFRCSQGFQLQNTPKKSCIYRSGYSFSRGCSYTCAKKIQVP
DCCPGFFGTLCEPCPGGQGGVCSGHGQCQDRLLGSGECRCHEGFHGTACEMCELGRYGPT
CAGVCDCAHGLCQEGLQGDGSCVCNVGWQGPRCDQNITAPQCPMKCDPNANCVQDSAAAP
ACVCAAGYSGNGINCSEVDPCAHDHGGCSPHANCTKVAPGQRTCTCQDGYTGDGELCQEV
NNCLIHHGGCHMHADCISTGPQQVSCSCREGYSGDGIRTCELLNPCSQNNGGCSPYAVCK
STGDGQRTCTCDAAHTVGDGFTCRARVGLELLRDRHASFFSLHLLEYKELKGDGPFTVFV
PRADLMTNLSQDELARIRAHHQLVFRYHVVGCRQLSVQELLEEGYVTTLSGHPLRIHERE
GSVYLNDFARVVSSDHEAVNGVLHFIDQVLLPPDVLHWEPDAAPVVRKNVTVAAESFGYK
IFSGLVKMAGLLPLLQDASHRPLTMLWPTDAALQALPPDRQDWLYHEDHRDKLAAILRGH
VIRNIEALASDLPNLGPLRTMHGTPISFSCSRARPGELTVGEEDAHIVQRHLLFEGGVAY
GIDQLLEPPGLGARCDRFETRPLRLKFCSICGLEPPCPEGSQEQGSPEACWRYYSKFWTS
PPLHSLALRSIWARSSLWGQPQGLSRGCHRNCVTTTWKPSCCPGHYGSECRACPGGASIP
CSGHGVCMDGMSGSGQCQCHSRFTGTACELCASGAFGPQCQACHCTSHGRCDEGLGGSGS
CFCDEGWTGPSCEVQLKLQPVCAPPCAPQARCRADNSCECGLGYEGDGRTCTVVDLCRYW
HGGCSQHANCSQVGTVVTCTCLPDYEGDGWSCRARDPCADGRRGGCSEHADCLSTGPNTR
RCVCHAGYVGDGLQCVEEPEPPVDRCLGQPPPCHVDAVCTDLHFQEKQAGVFHLQAPSGR
YGLNFSEAEAACAAQGAVLASLPQLSAAQKLGFHLCLLGWLANGSAAHPVVFPAADCGGG
QVGVVSLGIRKNRSECWDAYCYREQDVACRCRHGFVGDGMSMCNGKLLDVLAATANFSTF
YGMLLGYANATPRGLDFLDFLDDELTYKTLFVPVNEGFLDNMTLSGPDLELHASNTTFLS
TNASQDTVLLAHSGLSLVFSAVGPDNSSWAPVAPGAVVVSHVVVWDIMAFNGIIHALARP
LLAPLQPRAVVAPEAPPVMAGVGAVVAAGALLGLVAGAFYLRARGKATGFGFSTFQAEDD
AEEDFSPWQEGTSPTLVSVPNPVFGSHDAFCEPFDDSLLEDDFPDTQRILAVK
Download sequence
Identical sequences XP_005632513.1.84170

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]