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Domain assignment for XP_005664354.2.46622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005664354.2.46622
Domain Number 1 Region: 410-464
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.0000000293
Family SAM (sterile alpha motif) domain 0.0052
Further Details:      
 
Domain Number 2 Region: 1009-1038
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000471
Family Retrovirus zinc finger-like domains 0.0038
Further Details:      
 
Domain Number 3 Region: 256-327
Classification Level Classification E-value
Superfamily PX domain 0.0000085
Family PX domain 0.009
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005664354.2.46622
Sequence length 1063
Comment zinc finger CCHC domain-containing protein 14 isoform X2 [Sus scrofa]; AA=GCF_000003025.6; RF=representative genome; TAX=9823; STAX=9823; NAME=Sus scrofa; breed=Duroc; AL=Chromosome; RT=Major
Sequence
MVEKRCPLQRDGVYRWFSELPSPQRVEFLCGLLDLCIPLELRFLGSCLEDLARKDYHSLR
DSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQREAAGVLYRTLTHIDSIIHNYG
LQLNEGRTGDEFLLLFTMASNHPAFSFHQKQVLRQELTQIQSSLSGGGGGSGGGGPGGKS
ALPTCPACHKVTPRTEPPVGSVGNSLESALHTSAHSTEEALPKRPGGKHCRVSVEKIDLK
GLSHKKNERHVECSFELSQLYPEDNLEKFIPCLAGPDSFYLERNHVDLEADLRYLASLPS
HILKNDHVKKFFSTSSPTQQLQSPSPGTPSLSNVGTVMGVSGRPVCGVAGIPSSQSGAQH
HMQHPASAAALPHCSHAGAAGSALAYRTPMDSSPTILMPSSLQAPQPQEQNGILDWLRKL
RLHKYYPVFKQLTMEKFLSLTEEDLNKFESLTMGAKKKLKTQLELEKEKSEKRCLNPAAP
APVSSSGVARVPPTSHVGPVQAVRGSHAAALRVEVEQPPHQTAREGSSSECSSSSPSPMG
VQAREESSDSAEENDRRLEVHSEGADKDKPVTLLNHFTSSSARPTAQVLPVQNEAGSSPS
GHHPLPPQMMTASHMAPIRMLSSVHKAERGGADLKLLSSSVHSLLSLEERGKVSAPRSGL
KVDKGFGSAMLDVLPTSSPHQPMQVLSGLADSSAVSPAVSFGPRTKVVPASALDRAMKPA
QQPGLGAETSTAAPGTSSTVFHVARPPIKLLVSSSVPADSAVPGQTSCSSNVQISVPPAI
INPRTALYTANTKAAFSAMSSVPVGPLQGSFCANSNTASSSSHPSTSFANMASVPSCPAP
SSSPALSSVPESSFYSGGGGGGSSPGSVPASAQNHHHHHHHQQQQQPAPQQPAPAPPPGC
VVCTSCGCSGSCGSSGLTVSYANYFQHPFSGPSVFPFPFLPFSPVCGSGYVGAQQYGGGA
FPVVHSPYGGGVGPEPVLGGQSAFAVPPVQNFMAGAAGVYQAQGLVGSSNGSSHKKSGNL
SCYNCGATGHRAQDCKQPSMDFSRQGTFRLKYAPPAESLDSTD
Download sequence
Identical sequences F1S6K0
XP_005664354.2.46622

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