SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_005686987.1.57651 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_005686987.1.57651
Domain Number 1 Region: 1-183
Classification Level Classification E-value
Superfamily EF-hand 2.09e-28
Family Calmodulin-like 0.0000562
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005686987.1.57651
Sequence length 185
Comment PREDICTED: calcium and integrin-binding family member 4 [Capra hircus]; AA=GCF_001704415.1; RF=representative genome; TAX=9925; STAX=9925; NAME=Capra hircus; breed=San Clemente; AL=Chromosome; RT=Major
Sequence
MGQCLRYQMHWEDLEEYQALTFLTRNEILCIHDSFLKLCPPGKYYKEATLTVDQVSSLPA
LRVNPFRDRICRVFSHNNVFSFEDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEE
DLQRIILRLLNSDDMSEDLLTDLTSHVLNESDLDNDNMLSFSEFEHAMAKSPDFMNSFRI
HFWGC
Download sequence
Identical sequences A0A023T1Z1 C7A278 F1MQC6 L8IMQ3
NP_001069923.2.59421 NP_001069923.2.76553 NP_001158185.1.54773 NP_001158185.1.66739 XP_005686987.1.57651 XP_005895766.1.15283 XP_010838899.1.44457 XP_019826136.1.53367 XP_020769524.1.74333 ENSBTAP00000006645 9913.ENSBTAP00000006645 ENSBTAP00000006645

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]