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Domain assignment for XP_005858001.1.60319 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005858001.1.60319
Domain Number 1 Region: 402-566
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.44e-47
Family G proteins 0.00000262
Further Details:      
 
Domain Number 2 Region: 28-80
Classification Level Classification E-value
Superfamily RING/U-box 0.000000000167
Family RING finger domain, C3HC4 0.018
Further Details:      
 
Domain Number 3 Region: 167-234
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.000000195
Family B-box zinc-binding domain 0.0033
Further Details:      
 
Weak hits

Sequence:  XP_005858001.1.60319
Domain Number - Region: 122-163
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.00435
Family B-box zinc-binding domain 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005858001.1.60319
Sequence length 574
Comment PREDICTED: E3 ubiquitin-protein ligase TRIM23 isoform X1 [Myotis brandtii]; AA=GCF_000412655.1; RF=representative genome; TAX=109478; STAX=109478; NAME=Myotis brandtii; AL=Scaffold; RT=Major
Sequence
MAALVVNKAGSGLDSGRQGSWGTAVVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL
TRLPLHGRAIRCPFDRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAAEEAIGIS
GESIIRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLAKHRRVPLADKPHEKTMCSQ
HQVHAIEFVCLEEGCQTSPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRTF
TEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCVRAYFSDLHETLC
RQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVLAKQEI
TRLLETLQKQQQQFTEVADHIQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTI
LFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVD
SSHRDRVNEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRS
WYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA
Download sequence
Identical sequences G1P672 S7P4S7
ENSMLUP00000005549 XP_005858001.1.60319 XP_006081467.1.53796 XP_006762481.1.95426 ENSMLUP00000005549

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