SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_005899794.1.15283 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_005899794.1.15283
Domain Number 1 Region: 3-163
Classification Level Classification E-value
Superfamily EF-hand 1.82e-45
Family Calmodulin-like 0.00000668
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005899794.1.15283
Sequence length 166
Comment PREDICTED: centrin-4 [Bos mutus]; AA=GCF_000298355.1; RF=representative genome; TAX=72004; STAX=72004; NAME=Bos mutus; AL=Scaffold; RT=Major
Sequence
MASRPSSDQWKKNAAKIELNETQKQEIKEAFDLFDVDGSGTIDVKELKIAMRALGFEPKK
EEIKKMIAETDKEGIGTISFEKFFAIMSVKMSEKDEKEEILKAFKLFDDDDTGSISLNNI
KRVAKELGENLTDDELQEMLDEADHDGDGEINKEEFLKMMQKTTLY
Download sequence
Identical sequences Q32LH2
ENSBTAP00000021491 ENSBTAP00000021491 NP_001033128.1.59421 NP_001033128.1.76553 XP_005899794.1.15283 XP_010858576.1.44457

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]