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Domain assignment for XP_005989346.1.90931 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005989346.1.90931
Domain Number 1 Region: 467-601
Classification Level Classification E-value
Superfamily TIMP-like 8.24e-37
Family Netrin-like domain (NTR/C345C module) 0.01
Further Details:      
 
Domain Number 2 Region: 285-343
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000314
Family Laminin-type module 0.029
Further Details:      
 
Domain Number 3 Region: 341-394
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000335
Family Laminin-type module 0.021
Further Details:      
 
Domain Number 4 Region: 404-443
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000977
Family Laminin-type module 0.012
Further Details:      
 
Domain Number 5 Region: 95-175
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.00000267
Family APC10-like 0.065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005989346.1.90931
Sequence length 604
Comment PREDICTED: netrin-1 [Latimeria chalumnae]; AA=GCF_000225785.1; RF=representative genome; TAX=7897; STAX=7897; NAME=Latimeria chalumnae; AL=Scaffold; RT=Major
Sequence
MVLRFWEVLVILPSLCCLVEGVRGGYGMSMFAVQTSQPDPCYDENGNPRRCIPDFVNSAF
GKEVKVSSTCGKPPGRYCVVTEKGEERFRNCHICNASDPKKFHPPAYLTDLNNPHNLTCW
QSENYIQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKNWVPFQFYSTQ
CRKMYNKPNKAVITKQNEQEAICTDSHTDMYPLSGGLIAFSTLDGRPSAHDFDNSPVLQD
WVTATDIKVIFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCIKDRDD
NLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS
GRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPITHRKACKACDCHPVGAAGKTCNQTT
GQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTVASSTEEPADCDSYCKASK
GKLKINMKKYCKKDYAVQVHILKTDKAGEWWKFTVSIISVYKQGTNRIRRGDQILWVRAK
DVACKCPKIKPMKKYLLLGNDEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGK
CKRA
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Identical sequences H3ADP0
ENSLACP00000007761 XP_005989346.1.90931 ENSLACP00000007761

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