SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_005990028.1.90931 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_005990028.1.90931
Domain Number 1 Region: 21-341
Classification Level Classification E-value
Superfamily Clavaminate synthase-like 1.04e-67
Family Hypoxia-inducible factor HIF ihhibitor (FIH1) 0.000000000044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005990028.1.90931
Sequence length 347
Comment PREDICTED: hypoxia-inducible factor 1-alpha inhibitor isoform X1 [Latimeria chalumnae]; AA=GCF_000225785.1; RF=representative genome; TAX=7897; STAX=7897; NAME=Latimeria chalumnae; AL=Scaffold; RT=Major
Sequence
MAAAAGGGGECGQPDPQCPGWNEAQLRKYSFQTRAIPRLSHRDPRAEALVDNEEPVVLTD
TNLVYPALKWDLDYLQENIGNGDFSVYTASTHKFLYYDEKKMVNFVDFKPKSRREEMKFT
DFVDRLHEVQQKGSDERLYLQQTLNDTVGRKLVVDFLGFNWNWINRQQVKHNWGQLTSNL
LLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFDCLYPYPVHHPCDRQSQVDFEN
PDYERFPNFRNVIGYETVVGPGDVLYIPMYWWHHIESLLNGGVTITVNFWYKGAPTPKRI
EYPLRAHQKVAIMRNIEKMLGEALGEPQEVGPLLNMMIKGRYDQALS
Download sequence
Identical sequences H3BFN5
XP_005990028.1.90931 ENSLACP00000020706 ENSLACP00000020706

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]