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Domain assignment for XP_005996231.1.90931 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005996231.1.90931
Domain Number 1 Region: 525-893
Classification Level Classification E-value
Superfamily Hect, E3 ligase catalytic domain 8.37e-128
Family Hect, E3 ligase catalytic domain 0.00000000485
Further Details:      
 
Domain Number 2 Region: 19-160
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 2.14e-28
Family Synaptotagmin-like (S variant) 0.076
Further Details:      
 
Domain Number 3 Region: 469-508
Classification Level Classification E-value
Superfamily WW domain 0.00000000000000157
Family WW domain 0.00022
Further Details:      
 
Domain Number 4 Region: 342-381
Classification Level Classification E-value
Superfamily WW domain 0.0000000000000695
Family WW domain 0.0014
Further Details:      
 
Domain Number 5 Region: 182-220
Classification Level Classification E-value
Superfamily WW domain 0.00000000000376
Family WW domain 0.0014
Further Details:      
 
Domain Number 6 Region: 417-457
Classification Level Classification E-value
Superfamily WW domain 0.0000000000208
Family WW domain 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005996231.1.90931
Sequence length 900
Comment PREDICTED: E3 ubiquitin-protein ligase NEDD4 isoform X3 [Latimeria chalumnae]; AA=GCF_000225785.1; RF=representative genome; TAX=7897; STAX=7897; NAME=Latimeria chalumnae; AL=Scaffold; RT=Major
Sequence
MDSALEVRGLPVDEEQSRILRAKVLAGIGLAKKDIFGASDPYVRVSLYDPVSGELTSVQT
KTIKKTLHPKWNEEFLFRVFPRQHRLLFEVFDENRLTRDDFLGKVDVPLHHIPTENPNTE
RPYSFKDFLLHPRSYKSRVKGHLRLKMAYLPRNGTDEEGTEQPEDLETGWEMIDQQDTAG
YSQQVPSLPPGWEEKQDNLGRTYFVNHETRITQWQRPASQEIVADTDHGRSLLLEAQHVF
TNRRQISEQTENSENDSPDGWEVVTEDEATVYSNRNSQSPPPPHSLTAQSTFGTDLVEEL
NRRLNTSVNIVPDEHGSCSSHSSRRESTQATTFEEQPAQPVLLPTSAGLPPGWEEKQDDK
GRIYYVNHNNRTTTWTRPVLQTTTEAAQSASCQSATVTHPSQLSPKDSPEQSPQQALIHT
YGFLPSGWEICHAPNGKSFFIDHNTQMTTWEDPRLKIPVHMRKQPSLDPSDLGPLPPGWE
ERVHSDGRVFYIDHNTKTTQWEDPRLQNVAVTGPAVPYSRDYKQKYEYFRKKLKKPTEIP
NRFEMKLRRSAVLEDSYRHIISVKRPDLLKARLWIEFENEKGLDYGGVAREWFFLISKEM
FNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMSVYHGKLLDGFFIRPF
YKMMLQKPITLNDMESVDSEYYNSLKWILENDPTDLDLRFIIDEEFFGQTQQHELKTGGA
DIVITNKNKREYIHLVIQWRFVDRIQKQMAAFKEGFYELIPQDLIKIFDENELELLMCGL
GDVDVNDWRENTKYKNSYHANHPVIQWFWKTVLLMDSEKRIRLLQFVTGTSRVPMNGFAE
LYGSNGPQLFTIEQWGTPDKLPRAHTCFNRLDLPPYESFEDLREKLHTAIENAQGFDGVD
Download sequence
Identical sequences H3B711
XP_005996231.1.90931 ENSLACP00000017682

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