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Domain assignment for XP_006063814.1.26621 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006063814.1.26621
Domain Number 1 Region: 79-164
Classification Level Classification E-value
Superfamily HMG-box 2.36e-31
Family HMG-box 0.00000617
Further Details:      
 
Domain Number 2 Region: 3-81
Classification Level Classification E-value
Superfamily HMG-box 3.53e-27
Family HMG-box 0.00000728
Further Details:      
 
Weak hits

Sequence:  XP_006063814.1.26621
Domain Number - Region: 183-208
Classification Level Classification E-value
Superfamily ARM repeat 0.0863
Family GUN4-associated domain 0.076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_006063814.1.26621
Sequence length 209
Comment PREDICTED: high mobility group protein B2 [Bubalus bubalis]; AA=GCF_000471725.1; RF=representative genome; TAX=89462; STAX=89462; NAME=Bubalus bubalis; breed=Mediterranean; AL=Scaffold; RT=Major
Sequence
MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF
EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL
SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG
SKKKNEPEDEEEEEEEEDEDEEEEDEDEE
Download sequence
Identical sequences A0A0D9S252 A0A2K5K6C0 A0A2K6CMK2 A0A2K6NV24 H2QQF6 H9EQP8 L8IR12 P26583 P40673
ENSPTRP00000028484 ENSP00000296503 ENSP00000393448 ENSP00000404912 ENSP00000296503 ENSP00000393448 ENSP00000404912 ENSPTRP00000028484 ENSBTAP00000020096 NP_001032705.1.59421 NP_001032705.1.76553 NP_001124160.1.87134 NP_001124160.1.92137 NP_001124161.1.87134 NP_001124161.1.92137 NP_002120.1.87134 NP_002120.1.92137 XP_003823467.1.60992 XP_003823468.1.60992 XP_003950520.1.37143 XP_004278726.1.21590 XP_004657191.1.11716 XP_004657192.1.11716 XP_005892822.1.15283 XP_006063814.1.26621 XP_007998463.1.81039 XP_007998465.1.81039 XP_010362296.1.97406 XP_010362297.1.97406 XP_010838549.1.44457 XP_011714047.1.29376 XP_011714048.1.29376 XP_011815002.1.43180 XP_011815003.1.43180 XP_012391776.1.21590 XP_012391777.1.21590 XP_014332787.1.15283 XP_016808005.1.37143 XP_019787921.1.83887 XP_019787922.1.83887 XP_019787924.1.83887 XP_019821332.1.53367 XP_517538.3.37143 gi|11321591|ref|NP_002120.1| gi|194688133|ref|NP_001124160.1| gi|194688135|ref|NP_001124161.1| ENSTTRP00000014824 ENSP00000296503 ENSBTAP00000020096 9598.ENSPTRP00000028484 9606.ENSP00000296503 9913.ENSBTAP00000020096 ENSTTRP00000014824

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