SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_006082013.1.53796 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_006082013.1.53796
Domain Number 1 Region: 299-483
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.41e-39
Family SPRY domain 0.00021
Further Details:      
 
Domain Number 2 Region: 14-85
Classification Level Classification E-value
Superfamily RING/U-box 3.98e-21
Family RING finger domain, C3HC4 0.01
Further Details:      
 
Domain Number 3 Region: 95-156
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.0000000000412
Family B-box zinc-binding domain 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_006082013.1.53796
Sequence length 493
Comment PREDICTED: tripartite motif-containing protein 35 [Myotis lucifugus]; AA=GCF_000147115.1; RF=representative genome; TAX=59463; STAX=59463; NAME=Myotis lucifugus; AL=Scaffold; RT=Major
Sequence
MESEPSLSPTLSRSIKEELLCAVCYDPFRDAVTLRCGHNFCRECVTRCWEVQTTPTCPVC
KDRVAPADLRTNHTLNNLVEKLLREDTEGGRYAGHRSPRFCRAHRGQLSLFCIEDKELLC
CSCQADPRHLGHRVQAVKDTAHDFRAKCRNMEHSLREKAKAFWAMRRSYEAIAKHNQVEA
TWLERRIRQEFEKLREFLRGEEQAILDVMAEEARQKQHLVEEKMKQLKKDTETLAHEIER
LQMEMKEDDISFLMKHKSRKRRLFCTMEPEPVQPGMLINVCKYLDSLQYRVWKKMVMSVE
TVPFSFDPNTAAGWLAVSEDLTSVTNHGYRVQVENPERFSSAPCLLGSRSFSHGSHAWEV
DLGGLPSWRVGVVRMCLETGPEGYSHSCYQDTRSGFWYLCRTQGVEGDHCVTSDPATSPL
VPSIPRRLRVELECEEGELSFYDAERQCHLYTFHARFGEVRPYFYLGGTRGNGPPEPLRI
CPLRITVKKELDT
Download sequence
Identical sequences G1P2E7 L5LSG0
ENSMLUP00000004036 XP_006082013.1.53796 XP_006764828.1.95426 ENSMLUP00000004036

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]