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Domain assignment for XP_006112095.1.96668 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006112095.1.96668
Domain Number 1 Region: 80-360
Classification Level Classification E-value
Superfamily L domain-like 1.7e-53
Family Ngr ectodomain-like 0.0012
Further Details:      
 
Domain Number 2 Region: 418-516
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000665
Family Fibronectin type III 0.0031
Further Details:      
 
Weak hits

Sequence:  XP_006112095.1.96668
Domain Number - Region: 35-78
Classification Level Classification E-value
Superfamily L domain-like 0.000527
Family Ngr ectodomain-like 0.0095
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_006112095.1.96668
Sequence length 661
Comment PREDICTED: leucine-rich repeat transmembrane protein FLRT2 [Pelodiscus sinensis]; AA=GCF_000230535.1; RF=representative genome; TAX=13735; STAX=13735; NAME=Pelodiscus sinensis; AL=Scaffold; RT=Major
Sequence
MGLWTRMWFKDWAAFLNSWLIISLGLLMQVSKTLACPNVCRCDRNFVYCNERSLTSVPLG
IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAVSLKLLFLSKNHLSSVPVGLPV
DLQELRVDENRIAIISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFGHLTKLKEFSIVRN
SLSYPPPDLPGTHLLRLYLQDNQITHIPLSAFSNLHKLERLDISNNQLRMLVKGVFDNLH
NLKQLTARNNPWLCDCSIKWVTEWLKFIPSSINVRGFMCQGPEQVRGMAVRELNMNMLSC
PTTTPGLPIITPAPATTLPTTLAPTSSVPNPTDKHSPFPPTTSTLPTVPDKEGGERVTPP
ISERIQLSIHFVNDTCIQVHWLSLFTVMAYKLTWVKMGHSLIGGIVQERIVSGEKQHLSL
LNLEPKSTYRICLVPLDAFNNYRAGEDTVCSEATTKASHLNNGSNTASSHEQTTTQNMGS
PFLLAGLIGGAVIFVLVVLLSIFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSI
LEMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVSDLEHCH
T
Download sequence
Identical sequences K7F496
XP_006112095.1.96668 XP_006112096.1.96668 XP_006112098.1.96668 XP_006112099.1.96668 XP_006112100.1.96668 XP_006112101.1.96668 XP_006112103.1.96668 XP_006112104.1.96668 XP_006112105.1.96668 XP_006112106.1.96668 XP_006112107.1.96668 XP_006112108.1.96668 ENSPSIP00000002856 ENSPSIP00000002856

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