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Domain assignment for XP_006283212.1.15642 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006283212.1.15642
Domain Number 1 Region: 386-671
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 2.16e-75
Family Protein kinases, catalytic subunit 0.00012
Further Details:      
 
Domain Number 2 Region: 278-325
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000136
Family EGF-type module 0.014
Further Details:      
 
Weak hits

Sequence:  XP_006283212.1.15642
Domain Number - Region: 243-271
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0527
Family EGF-type module 0.055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_006283212.1.15642
Sequence length 720
Comment hypothetical protein CARUB_v10004243mg [Capsella rubella]; AA=GCF_000375325.1; RF=representative genome; TAX=81985; STAX=81985; NAME=Capsella rubella; cultivar=Monte Gargano; AL=Scaffold; RT=Major
Sequence
MKLYEGVFLVAICFHAYTQLVKGKPQPREGCSTRCGNVTIEYPFGTSSGCYYAKDPSFKL
TCNEKKKQLLYRNLPVISISHSSELRVRVPPSYSCYNSRGNLSDWLYNNFTLGDFTLSTK
NRLTAVGCNIHAFLSIYGTNSSSGCMSMCDSRPEANEECSGKGCCQSSVSRGDKSFEVQA
KSFNNYTSVQSFNPCNYAFLVENGSFNFDALEDLKNLRNVTDFPVVLDWSIGQQTCEQVR
NTNICGGNSTCFDSTRGVGYNCKCFEGFEGNPYLSYGCHDIDECTSIRHNCSDPNTCRNT
RGSFYCKCQPGYRLNTNTMSCKRKDVGWTIIMLGTVIGFLAILLGISCIRQKTKHRKNTE
LRQKFFEKNGGGILIHRLSGAGPSNVDVKIFTEECMKEATNGYDESRILGQGGQGTVYKG
ILPDNSIVAIKKARLGENSQVEQFINEVLVLSQINHRNVVKLLGCCLETEIPLLVYEFIT
NGTLFDHLHGSMFDSSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDVKTANILLDENL
TAKVADFGASRLIPMDKEQLTTLVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELISG
QKALCFERPHHSKHLVGHFVSSTKENRLHEIIDRKVMNEDNQWEIHEAAKIAGKCTRIMG
EERPKMKEVAGELEALKVKATKHKFSDQYLEQDEHLLGVQIFSAQDIIKNVPILDNEAGR
Download sequence
Identical sequences R0GUZ6
XP_006283212.1.15642 Carubv10004243m|PACid:20895084

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