SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_006370997.1.11743 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_006370997.1.11743
Domain Number 1 Region: 368-657
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.24e-75
Family Protein kinases, catalytic subunit 0.00011
Further Details:      
 
Domain Number 2 Region: 1-67
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 0.000000000111
Family alpha-D-mannose-specific plant lectins 0.0065
Further Details:      
 
Domain Number 3 Region: 47-141
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 0.00000000072
Family alpha-D-mannose-specific plant lectins 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_006370997.1.11743
Sequence length 662
Comment hypothetical protein POPTR_0019s02480g [Populus trichocarpa]; AA=GCF_000002775.3; RF=representative genome; TAX=3694; STAX=3694; NAME=Populus trichocarpa; AL=Chromosome; RT=Major
Sequence
MLDSGNLVLYNEHSDVIWESFNFPTDTILGGQNLYAGGELLSSASTTNLSTGRFHLKIQY
DGNLVLYPIDTIDTSVDAYWNTATFGSGTHLYLNYTGQLLILNNTLASGIPVFSSDSESE
NSSIIYRATLEYDGIFRLYSHNFDSNGAYTTSLMHYAPKSQCEVKSFCGLNSYCTMNDNQ
PYCSCLPGTVFVNPIQRYNGCKRNYTEELCKVAEETSSYSITDMERMTWDDFPYFRNSMS
EEDCRKSCLQDCNCAGALYESGDCKKVKFPVKYAKRLEGDSSKVFFKVGLKSVESRNRSI
ATATKPPVVHKTSKKTVMLICAMSVAFITCFSIAIAVSVFFISKSRVVKARMRLGSGNLG
LAHELTLRAFSYRELKNATKGFREELGKGSFGAVYKGTLYKGKKVIAVKRLEKLVSEGER
EFLTEMRSIGKTHHKNLVRLLGYCTEDSQRLLVYEYMSNGSLADLLFRTERIPNWSHRVK
IALDIAKGILYLHEECEAPIIHCDIKPQNILMDDFWNAKISDFGLAKLLVPDQTRTFTMV
RGTRGYLAPEWHKNTPISVKADVYSYGVMLLEIVFCRRNVETNVSRPEEVQLSNWAYELL
VERELDKLDLGEDVDLQNLEKMVMVGMWCIQDEPGIRPSMKSVVLMLEGITDVSVPPHPT
SA
Download sequence
Identical sequences U5FF78
POPTR_0019s02480.1|PACid:18218679 XP_006370997.1.11743

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]