SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_006541200.1.92730 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_006541200.1.92730
Domain Number 1 Region: 109-271
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.52e-34
Family DnaQ-like 3'-5' exonuclease 0.0000145
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_006541200.1.92730
Sequence length 336
Comment PREDICTED: apoptosis-enhancing nuclease isoform X1 [Mus musculus]; AA=GCF_000001635.25; RF=reference genome; TAX=10090; STAX=10090; NAME=Mus musculus; AL=Chromosome; RT=Patch
Sequence
MVAGEVPESTQCPSLTSLNTKDVVRRRHKRRSRQHQRFMARKALLQEQELLSTAPGPGLC
LLPSPSQMPAVTEASDSRRQRPKARSGSNGLCSKKSVPREAPRPGPIKCVAIDCEMVGTG
PQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHKAIPFQVAQKEI
LKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNLLSQPSSLIRTRVSLKDLALNL
LHKKIQVGHQGHSSVEDAMTAMELYQLVEVQWEQQVASSAQAPAEDRGPDSSTDVEQYMD
DQYWPEDLTQSTGAETNGGPDRQEGEEGQGARSAPP
Download sequence
Identical sequences Q9CZI9
ENSMUSP00000103046 ENSMUSP00000103048 ENSMUSP00000103044 NP_080807.3.92730 XP_006541200.1.92730 ENSMUSP00000103046

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]