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Domain assignment for XP_006717563.1.92137 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006717563.1.92137
Domain Number 1 Region: 328-406
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 1.43e-25
Family Intermediate filament protein, coiled coil region 0.00000687
Further Details:      
 
Domain Number 2 Region: 101-138
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.0000000000000115
Family Intermediate filament protein, coiled coil region 0.00025
Further Details:      
 
Weak hits

Sequence:  XP_006717563.1.92137
Domain Number - Region: 151-241
Classification Level Classification E-value
Superfamily Myosin rod fragments 0.0144
Family Myosin rod fragments 0.0091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_006717563.1.92137
Sequence length 466
Comment PREDICTED: vimentin isoform X1 [Homo sapiens]; AA=GCF_000001405.37; RF=reference genome; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Patch
Sequence
MSTRSVSSSSYRRMFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGV
YATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
Download sequence
Identical sequences A0A2J8VKT8 G2HJ38 G3R2A8 P08670 V9HWE1
9606.ENSP00000224237 NP_003371.2.87134 NP_003371.2.92137 XP_003831224.1.60992 XP_006717563.1.92137 XP_018890043.1.27298 gi|62414289|ref|NP_003371.2| ENSPTRP00000003945 ENSP00000224237 ENSP00000446007 ENSP00000224237 ENSP00000446007 ENSP00000224237 ENSPTRP00000003945 HR4796

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