SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for XP_006762234.1.95426 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006762234.1.95426
Domain Number 1 Region: 27-140
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.14e-28
Family Spermadhesin, CUB domain 0.00052
Further Details:      
 
Domain Number 2 Region: 235-349
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.000000000000249
Family Spermadhesin, CUB domain 0.0035
Further Details:      
 
Domain Number 3 Region: 438-475
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000484
Family LDL receptor-like module 0.00085
Further Details:      
 
Domain Number 4 Region: 148-185
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000017
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 5 Region: 194-233
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000011
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 6 Region: 399-436
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000236
Family LDL receptor-like module 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_006762234.1.95426
Sequence length 753
Comment PREDICTED: low-density lipoprotein receptor-related protein 3 isoform X3 [Myotis davidii]; AA=GCF_000327345.1; RF=representative genome; TAX=225400; STAX=225400; NAME=Myotis davidii; AL=Scaffold; RT=Major
Sequence
MTVKKKPEVNIVLTGRLSSAVPALAACSGKLEQHTERRGVIYSPAWPLNYPPGTNCSWYI
QGDRGDMITISFRNFDVEESHQCSLDWLMLGPAAPPRQEAFRLCGSAIPPAFISARDHVW
IFFHSDASSSGQAQGFRLSYIRGKLGQASCQADEFRCDNGKCLPGPWQCNTVDECGDGSD
EGNCSAPASEPPGSLCPGGTFPCSGARSTRCLPVERRCDGTQDCGDGSDEAGCPDLACGR
RLGSFYGSFASPDLFGAARGPSDLHCTWLVDTQDTRRVLLQLELRLGYDDYVQVYEGLGE
RGDRLLQTLSYRSNHRPVSLEAAQGRLTVAYHARARSAGHGFNATYQVKGYCLPWEQPCG
SSIEGDMGDTGEQGCFSEPQRCDGWWHCASGRDEQGCPACPPDQYPCEGGSGLCYAPADR
CNNQKSCPDGADEKNCFSCQPGTFHCGTNLCIFETWRCDGQEDCQDGSDEHGCLAAVPRK
VITAALIGSLVCGLLLVIALGCAFKLYSLRTQEYRAFETQMTRLEAEFVRREAPPSYGQL
IAQGLIPPVEDFPVYSASQASVLQNLRTAMRRQMRRHASRRGPSRRRLGRLWNRLFHRPR
APRGQIPLLTAARTSQTVLGDGLLQPAPGAALDPPAPLTDTGSAGAAGDGSPSAPVHTPE
VGPSVLPPLSLQDPEYRPVDKDRKACRDPLMDSPASVDMPREPCSAQDPHSLAPTAGSTL
GPHPPEPLGVCRSPPPPCSPTLEASDDEALLVC
Download sequence
Identical sequences XP_006762234.1.95426

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