SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_007448950.1.90284 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_007448950.1.90284
Domain Number 1 Region: 152-212
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 3.01e-24
Family KRAB domain (Kruppel-associated box) 0.0014
Further Details:      
 
Domain Number 2 Region: 380-436
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.9e-22
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 3 Region: 833-889
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.54e-21
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 4 Region: 436-492
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.26e-20
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 5 Region: 720-777
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.28e-20
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 6 Region: 874-926
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.57e-20
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 7 Region: 777-833
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.78e-20
Family Classic zinc finger, C2H2 0.0081
Further Details:      
 
Domain Number 8 Region: 344-393
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000106
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 9 Region: 683-734
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000121
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_007448950.1.90284
Sequence length 1000
Comment PREDICTED: zinc finger protein 316 [Lipotes vexillifer]; AA=GCF_000442215.1; RF=representative genome; TAX=118797; STAX=118797; NAME=Lipotes vexillifer; AL=Scaffold; RT=Major
Sequence
MAALHTPPDSPAAQRERAEDGSECDPDQEEEKGEEEGELAKEEAAVVEAEAAEAVAEVAE
ELEADRVQAGLGRQAEDANAEAVVAEEQSPASGTQERFSCGGDAESPGLQEKALQASRAP
AMSRGEDLEQDEDEDEDEDEDKDEDGSLASGSQGLVAFEDVAVYFSLEEWERLDADQREL
YQEVMQENYGILVSLGYPIPKPDLIFRLEQGEEPWVPDSPRPEEGDIVTGVYTGAWFWTD
DIEDHEEEDDEDFLAEVAEEENEPPGLWSAAYGVGDVPGTWGPDDSDSAQTPEGWGLDPG
GLGVLAEGSEAKAFLQGREPGASLLAPWAFPAAVAAPVGRPETTCDVCGKVFPHRSRLAK
HQRYHAAVKPFGCDECGKGFVYRSHLAIHQRTHTGEKPFPCPDCGKRFVYKSHLVTHRRI
HTGERPYRCAFCGAGFGRRSYLVTHQRTHTGERPYPCPHCGRSFSQSSALARHQAVHTAD
RPHCCPDCGQAFRLRADFQRHRRGGGCAEPGGDGPRREPCETGPSAGPEEAEAGPEGPEV
DEADGEAEAREAAMEAPTPGRKDDPEPDRRFLGLGNGLGEGEGPSSHPLGFHLTVHPKSW
LHPDGFPILGLPDFAERLSTDGRPLSGPLGGRLSLVEGAGLACDPFGGGAGPGGGGGLRA
FGPAVGGLLAEPAPAALAEEESPWICSDCGKTFGRRAALAKHQRYHAGERPHRCADCGKS
FVYGSHLARHRRTHTGERPFPCPECGARFARGSHLAAHVRGHTGEKPFVCGVCGAGFSRR
AHLTAHGRAHTGERPYACGECGRRFGQSAALTRHQWAHAEEKPHRCPDCGKGFGHSSDFK
RHRRTHTGEKPFRCTDCGRGFAQRSNLAKHRRGHTGERPFPCPECGKRFSQRSVLVTHQR
THTGERPYACASCGRRFSQSSHLLTHMKTHRGTAGAPGQTPAAPAPKAEAPAKGLQSAGA
GTGPGERGSTLLEFAGGTSFGSEPTAAFAGPSGAYEESIM
Download sequence
Identical sequences XP_007448950.1.90284

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]