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Domain assignment for XP_007505142.1.35504 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_007505142.1.35504
Domain Number 1 Region: 92-210
Classification Level Classification E-value
Superfamily BRCT domain 4.34e-24
Family DNA ligase 0.068
Further Details:      
 
Domain Number 2 Region: 227-314
Classification Level Classification E-value
Superfamily BRCT domain 2.22e-23
Family DNA topoisomerase II binding protein 1, TopBP1 0.028
Further Details:      
 
Domain Number 3 Region: 360-461
Classification Level Classification E-value
Superfamily BRCT domain 4.45e-21
Family DNA topoisomerase II binding protein 1, TopBP1 0.0000207
Further Details:      
 
Domain Number 4 Region: 613-744
Classification Level Classification E-value
Superfamily BRCT domain 6.67e-20
Family 53BP1 0.089
Further Details:      
 
Domain Number 5 Region: 555-632
Classification Level Classification E-value
Superfamily BRCT domain 0.000000772
Family DNA-repair protein XRCC1 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_007505142.1.35504
Sequence length 749
Comment PREDICTED: DNA topoisomerase 2-binding protein 1-like isoform X3 [Monodelphis domestica]; AA=GCF_000002295.2; RF=representative genome; TAX=13616; STAX=13616; NAME=Monodelphis domestica; AL=Chromosome; RT=Major
Sequence
MSCGYIPPPVWSLVLDSHHRGRCLKGVRVVKMALQYRTPYVRFVMARGNTGLFFAAFESI
KEYMSEENLQVLTKEEALNIKENDTSFYVFDPFSGSAFDHLRKVGCRIISPQVIIFCIQH
RQCIPVIEYPVYNMIMADVIISCTSFHKETKEEIHKYVQMMGGQFCRDLNVTVTHLIAGK
VGSKKYLVAASLGIPIMLTSWIKELWRKSQENCMTKFSSINIEYFKCPLFFGCTICVSGL
CTLERRAVQQLTTNHGGQYMGHLKMNVCTHLIVQEPRGEKYEFAKKWNIHCVTAEWFYHS
IEKGFCQDEAMYRTEPFSETNSEPYTSTTLGQNNEASGYINEFPNNSVMNDKLESLLENL
QNLDINALQAPMDLLNGCRIYLCGFKDKKLDEDKLRRLISCGGGVCLNQFNEDVTHIIVK
DYDAELKPFWTISTHRPHILEAKWLLECFSKGYLLSEEQYIQLNYQPVEIPLSEQAGMKM
NNSFSKVEYRDAEKLQQANEDLLFQNDNDDMIIDDDEMSEAEIFNNPTHVTVQVKNQSSF
NPSLLLETLTINESLFSQKNFLVVGFSEEDESLLTSAIKENDGKILPFHSRSIVDYIVVP
LLECEVESTIGEVVTDTWLITCIEQQKLFDPKSNPLFTPIPVLEGSDTPLENCILSFSQF
IGAEKDSLVYLANLLGARVQEFFVHKDNAKNDMFASTHLIVKQPDGSKYKAAQKWGLPAV
TMAWILETAKLGKRADEYKFMVGNLPKQE
Download sequence
Identical sequences K7E6B9
ENSMODP00000041321 XP_007505142.1.35504 ENSMODP00000041321

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